RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 IGLV3-10A0A075B6K4 115 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 KRBA1A5PL33 1030 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 H0Y626 953 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FGF10O15520 208 aaPredicted RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 MFSD11O43934 449 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 CYP17A1P05093 508 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ITGAXP20702 1163 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 OR1E1P30953 314 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FCHO2Q0JRZ9 810 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 BST1Q10588 318 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TUBB3Q13509 450 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 LSM12Q3MHD2 195 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 MPPE1Q53F39 396 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FAM209AQ5JX71 171 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 SLC7A5P1Q8MH63 180 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 NPWQ8N729 165 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 PLD5Q8N7P1 536 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 NAT16Q8N8M0 369 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 OR7G1Q8NGA0 311 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 LRRN4Q8WUT4 740 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 IRF7Q92985 503 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RMND5BQ96G75 393 aaPredicted RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 MED30Q96HR3 178 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FAM111AQ96PZ2 611 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FERMT1Q9BQL6 677 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 C1orf50Q9BV19 199 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 LIN28AQ9H9Z2 209 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 GTSE1Q9NYZ3 720 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RNF11Q9Y3C5 154 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 A0A1B0GVM2 712 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TCAF2A6NFQ2 919 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 DRGXA6NNA5 263 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ANHXE9PGG2 379 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 DCLK1O15075 740 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 IDH3BO43837 385 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 GCATO75600 419 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 SPAG6O75602 509 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 NFATC1O95644 943 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 PROCP04070 461 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TYRP14679 529 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RHOQP17081 205 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 HOXD9P28356 352 aaPredicted RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 HOXC13P31276 330 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 HCAR3P49019 387 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 ALDH18A1P54886 795 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 GALNT2Q10471 571 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
CECR3-201ENST00000428828 CDH18Q13634 790 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TFDP2Q14188 446 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FASTKD3Q14CZ7 662 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 DHCR24Q15392 516 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TAZQ16635 292 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 C6orf52Q5T4I8 152 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 PAOXQ6QHF9 649 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TP53INP2Q8IXH6 220 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 WFDC5Q8TCV5 224 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 DEPDC1BQ8WUY9 529 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 TAMM41Q96BW9 452 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 FAM83CQ9BQN1 747 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RTKNQ9BST9 563 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ARMC7Q9H6L4 198 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 RPF2Q9H7B2 306 aaKnown RBP11.39□□□□□ -0.59
CECR3-201ENST00000428828 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 HPS4Q9NQG7 708 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 CLEC4EQ9ULY5 219 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 SATB2Q9UPW6 733 aa11.39□□□□□ -0.59
CECR3-201ENST00000428828 ATG2BQ96BY7 2078 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 OTOL1A6NHN0 477 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 DFFAO00273 331 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 LIASO43766 372 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ADH1CP00326 375 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ADH5P11766 374 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ZNF26P17031 533 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 HTR7P34969 479 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 PTPN7P35236 360 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 BMXP51813 675 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 NDST2P52849 883 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 EPHB1P54762 984 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 CDH4P55283 916 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 TUBA1BP68363 451 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 CDKL1Q00532 357 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 GBE1Q04446 702 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 ZNF177Q13360 481 aaPredicted RBP11.38□□□□□ -0.59
CECR3-201ENST00000428828 PDGFRLQ15198 375 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 HIF1AQ16665 826 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 TRIM16LQ309B1 348 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 RALGPS1Q5JS13 557 aa11.38□□□□□ -0.59
CECR3-201ENST00000428828 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms