RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OR52E6Q96RD3 313 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 GPN1Q9HCN4 374 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DUS2Q9NX74 493 aaKnown RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 KCTD5Q9NXV2 234 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 NOX1Q9Y5S8 564 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 A0A0G2JLL6 359 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 GLYATL1P3A0A0U1RQE8 302 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PER2O15055 1255 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 CHST10O43529 356 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 LRATO95237 230 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PGM3O95394 542 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 GRIA3P42263 894 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 BLKP51451 505 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 MAPK10P53779 464 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SEC13P55735 322 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PPIDQ08752 370 aaKnown RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 KCNA10Q16322 511 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 VPS26BQ4G0F5 336 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PRRT2Q7Z6L0 340 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 EFHD2Q96C19 240 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SLC47A1Q96FL8 570 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 EXOC2Q96KP1 924 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 DHRS1Q96LJ7 313 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 RNF121Q9H920 327 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 PLGRKTQ9HBL7 147 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 SORCS3Q9UPU3 1222 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 C2CD2Q9Y426 696 aa8.91□□□□□ -0.98
CTNND1-208ENST00000428599 WASHC1A8K0Z3 465 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 WASH3PC4AMC7 463 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PROCP04070 461 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SLC35G6P0C7Q6 338 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RARAP10276 462 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 LAMP2P13473 410 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ARF4P18085 180 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 WASP42768 502 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 GRIA4P48058 902 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PTPN5P54829 565 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CORO7P57737 925 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CYP4F2P78329 520 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TRAP1Q12931 704 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 UBXN2BQ14CS0 331 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 MSANTD2Q6P1R3 559 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 WASH2PQ6VEQ5 465 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 NANOGNBQ7Z5D8 188 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SLC43A3Q8NBI5 491 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 DNAJB14Q8TBM8 379 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 DPEP2Q9H4A9 486 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 NXF3Q9H4D5 531 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SAR1AQ9NR31 198 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 HEBP2Q9Y5Z4 205 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CHD2O14647 1828 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CCNE2O96020 404 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TRBC1P01850 177 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 APOC1P02654 83 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CYP17A1P05093 508 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 IDO1P14902 403 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 FGFR3P22607 806 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PDHA2P29803 388 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 GRM5P41594 1212 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PPP3R1P63098 170 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RPL19P84098 196 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PRKG2Q13237 762 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 IRGCQ6NXR0 463 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TTC27Q6P3X3 843 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ATG14Q6ZNE5 492 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CCDC80Q76M96 950 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TMC3Q7Z5M5 1100 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SLAIN1Q8ND83 568 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 OR2AJ1Q8NGZ0 328 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 GAL3ST4Q96RP7 486 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TCF25Q9BQ70 676 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ARHGEF33A8MVX0 844 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 WNT7AO00755 349 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 COL9A3Q14050 684 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RFX4Q33E94 735 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 C16orf46Q6P387 395 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PRR23BQ6ZRT6 265 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ANKFN1Q8N957 763 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 OR5B17Q8NGF7 314 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 FCRL4Q96PJ5 515 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CST11Q9H112 138 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ACP6Q9NPH0 428 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 GMIPQ9P107 970 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 PCDHB1Q9Y5F3 818 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TRBV23OR9-2A0A075B6M9 112 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 NT5C1B-RDH14C9J2C7 533 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 AP5Z1O43299 807 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 DBIP07108 87 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RTP1P59025 263 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 MRPS5P82675 430 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RIPK1Q13546 671 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 FAM153CQ494X1 144 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ABRAXAS1Q6UWZ7 409 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 NPNTQ6UXI9 565 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CHRDL2Q6WN34 429 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 TMPRSS11BQ86T26 416 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF398Q8TD17 642 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 EPS8L1Q8TE68 723 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms