RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RALGPS1Q5JS13 557 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 OR10G6Q8NH81 332 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 ZNF564Q8TBZ8 553 aaPredicted RBP16.41■□□□□ 0.22
VARS-216ENST00000428445 TRIM11Q96F44 468 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 BPIFA3Q9BQP9 254 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 TBC1D10AQ9BXI6 508 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 RBM22Q9NW64 420 aaKnown RBP eCLIP16.41■□□□□ 0.225e-6■■■□□ 17
VARS-216ENST00000428445 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
VARS-216ENST00000428445 MRPS18BQ9Y676 258 aaKnown RBP16.41■□□□□ 0.22
VARS-216ENST00000428445 PTPN13Q12923 2485 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ACP5P13686 325 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
VARS-216ENST00000428445 CCR10P46092 362 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 GPLD1P80108 840 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 MC2RQ01718 297 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 PEX6Q13608 980 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 NCBP2-AS2Q69YL0 99 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 IYDQ6PHW0 289 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ARHGAP22Q7Z5H3 698 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 LRRC49Q8IUZ0 686 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 CCDC112Q8NEF3 446 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 LPCAT1Q8NF37 534 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ARRDC2Q8TBH0 407 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ASPSCR1Q9BZE9 553 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ANAPC7Q9UJX3 599 aa16.4■□□□□ 0.22
VARS-216ENST00000428445 ZNF891A8MT65 544 aaPredicted RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 HLA-DQB2P05538 268 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 SERPINB6P35237 376 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 GARSP41250 739 aaKnown RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 ARSEP51690 589 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 PIGHQ14442 188 aaPredicted RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 DEFB109BQ30KR1 87 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 C16orf46Q6P387 395 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 ZNF765Q7L2R6 523 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 NLGN4XQ8N0W4 816 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 NDUFAF2Q8N183 169 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 NLGN4YQ8NFZ3 816 aaPredicted RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 TEKT4Q8WW24 435 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 TDRD1Q9BXT4 1180 aaKnown RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 POLR1EQ9GZS1 481 aaKnown RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 ADNPQ9H2P0 1102 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 GPN2Q9H9Y4 310 aaPredicted RBP16.39■□□□□ 0.21
VARS-216ENST00000428445 PRDM8Q9NQV8 689 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 DTLQ9NZJ0 730 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 FLNCQ14315 2725 aa16.39■□□□□ 0.21
VARS-216ENST00000428445 ZNF30P17039 623 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 F8A1P23610 371 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 GALNT2Q10471 571 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 SLC10A2Q12908 348 aaPredicted RBP16.38■□□□□ 0.21
VARS-216ENST00000428445 CCDC122Q5T0U0 273 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 KDELC2Q7Z4H8 507 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 NLRP8Q86W28 1048 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 MAML1Q92585 1016 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 SLC45A3Q96JT2 553 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 DPYSL5Q9BPU6 564 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 PCDH9Q9HC56 1237 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 SCHIP1Q9P0W5 487 aaPredicted RBP16.38■□□□□ 0.21
VARS-216ENST00000428445 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
VARS-216ENST00000428445 NBASA2RRP1 2371 aa16.38■□□□□ 0.21
VARS-216ENST00000428445 SPENQ96T58 3664 aaKnown RBP16.37■□□□□ 0.21
VARS-216ENST00000428445 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 A6NCN8 305 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 MATN3O15232 486 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 STK17BO94768 372 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 ZNF28P17035 718 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 NR1D1P20393 614 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 SPINT3P49223 89 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 ZNF165P49910 485 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 GFERP55789 205 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 RAB15P59190 212 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 CDC20Q12834 499 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 LRP8Q14114 963 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 DPYSL3Q14195 570 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 PAFAH1B3Q15102 231 aaKnown RBP16.37■□□□□ 0.21
VARS-216ENST00000428445 QPCTQ16769 361 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 TDRD12Q587J7 1177 aaKnown RBP16.37■□□□□ 0.21
VARS-216ENST00000428445 WDR74Q6RFH5 385 aaPredicted RBP16.37■□□□□ 0.21
VARS-216ENST00000428445 EID2BQ96D98 161 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 BRD8Q9H0E9 1235 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 SARS2Q9NP81 518 aaKnown RBP16.37■□□□□ 0.21
VARS-216ENST00000428445 ATXN10Q9UBB4 475 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
VARS-216ENST00000428445 A0A1B0GTH6 734 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 K7EM74 188 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 MMP2P08253 660 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 PIRTP0C851 137 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 ZNF8P17098 575 aaPredicted RBP16.36■□□□□ 0.21
VARS-216ENST00000428445 TYRP1P17643 537 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 MAP4P27816 1152 aaKnown RBP16.36■□□□□ 0.21
VARS-216ENST00000428445 TAS2R40P59535 323 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 GBE1Q04446 702 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 GALNT3Q14435 633 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 NR1I3Q14994 352 aa16.36■□□□□ 0.21
VARS-216ENST00000428445 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms