RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TOR4AQ9NXH8 423 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 TCEAL9Q9UHQ7 104 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 PCM1Q15154 2024 aa16.02■□□□□ 0.16
C9orf3-206ENST00000428313 A0A0X1KG70 313 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 F5H423 210 aaPredicted RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 PPEF1O14829 653 aaPredicted RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 SEMA3DO95025 777 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 PSAPP07602 524 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 GSTM1P09488 218 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 HNRNPLP14866 589 aaKnown RBP eCLIP16.02■□□□□ 0.153e-10■■■□□ 15.4
C9orf3-206ENST00000428313 ALOX12P18054 663 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 CAPN3P20807 821 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 GPR50Q13585 617 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 MTMR1Q13613 665 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 CAPRIN1Q14444 709 aaKnown RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 STARD3Q14849 445 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 TPRG1LQ5T0D9 272 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF691Q5VV52 312 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 RBM23Q86U06 439 aaKnown RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 RNF145Q96MT1 663 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 CEP41Q9BYV8 373 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 COA1Q9GZY4 146 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.02■□□□□ 0.15
C9orf3-206ENST00000428313 GGA3Q9NZ52 723 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 MKLN1Q9UL63 735 aa16.02■□□□□ 0.15
C9orf3-206ENST00000428313 MRPS14O60783 128 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MED26O95402 600 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 FPGSQ05932 587 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 INCA1Q0VD86 236 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 CLCA4Q14CN2 919 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 DPYSL2Q16555 572 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ESCO2Q56NI9 601 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 FAM205BPQ63HN1 556 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 FAM122CQ6P4D5 195 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 SCARA5Q6ZMJ2 495 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 SLC26A9Q7LBE3 791 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MCOLN3Q8TDD5 553 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 CCDC126Q96EE4 140 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ZBTB45Q96K62 511 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 GAD1Q99259 594 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 SEPHS2Q99611 448 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 TTYH2Q9BSA4 534 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 POLR3FQ9H1D9 316 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 NARFLQ9H6Q4 476 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ABI2Q9NYB9 513 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 BFARQ9NZS9 450 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 GTF2IRD1Q9UHL9 959 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 EFCAB9A8MZ26 197 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MICAL2O94851 1124 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 LRIG2O94898 1065 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MATN4O95460 622 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MT-ND1P03886 318 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 F7P08709 466 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ALDOCP09972 364 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 PSMB4P28070 264 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 HTR1EP28566 365 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ETV6P41212 452 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 TFAMQ00059 246 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 LIPEQ05469 1076 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF699Q32M78 642 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 UGT3A2Q3SY77 523 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 VPS26BQ4G0F5 336 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 Q5BKY6 102 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 VARS2Q5ST30 1063 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 TRAF7Q6Q0C0 670 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 ZDHHC13Q8IUH4 622 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 NLGN4XQ8N0W4 816 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 FBXL6Q8N531 539 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 SLC2A14Q8TDB8 520 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 OMA1Q96E52 524 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 DMRTB1Q96MA1 342 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 IARS2Q9NSE4 1012 aaKnown RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 MAGED2Q9UNF1 606 aaPredicted RBP16.01■□□□□ 0.15
C9orf3-206ENST00000428313 PCDHGB6Q9Y5F9 930 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 PCDHGA10Q9Y5H3 936 aa16.01■□□□□ 0.15
C9orf3-206ENST00000428313 CTDSP2O14595 271 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 PDPK1O15530 556 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 PRKD3O94806 890 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 CAPN1P07384 714 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 IL7P13232 177 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 NCK1P16333 377 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 JUNDP17535 347 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 MAGP20916 626 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 YWHAQP27348 245 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 CYP2C18P33260 490 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 PIGAP37287 484 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 NFIAQ12857 509 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 KIF19Q2TAC6 998 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 TBRG1Q3YBR2 411 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 ZNF470Q6ECI4 717 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 SYTL1Q8IYJ3 562 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 DCP1BQ8IZD4 617 aaKnown RBP16■□□□□ 0.15
C9orf3-206ENST00000428313 MIER2Q8N344 545 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 IL31RAQ8NI17 732 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 SETD6Q8TBK2 473 aa16■□□□□ 0.15
C9orf3-206ENST00000428313 TSPEARQ8WU66 669 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms