RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CILP2Q8IUL8 1156 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 RAB7BQ96AH8 199 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 CYTH2Q99418 400 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 FBRSQ9HAH7 460 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 WSB2Q9NYS7 404 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 CRLS1Q9UJA2 301 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 TMEM98Q9Y2Y6 226 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PCYT1BQ9Y5K3 369 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PRSS21Q9Y6M0 314 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 THADAQ6YHU6 1953 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PLXNA2O75051 1894 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 LAMTOR5O43504 91 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 TSPAN6O43657 245 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 TOP3BO95985 862 aaKnown RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 IGHV4-34P06331 123 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 PMLP29590 882 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 HADHAP40939 763 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 CCR3P51677 355 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 ZBTB16Q05516 673 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 SETMARQ53H47 684 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 HENMT1Q5T8I9 393 aaKnown RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 USP30Q70CQ3 517 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 HORMAD1Q86X24 394 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 LRRC6Q86X45 466 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 BEND7Q8N7W2 519 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 FZD4Q9ULV1 537 aa13.35□□□□□ -0.27
PRPF39-202ENST00000424478 OAS3Q9Y6K5 1087 aaKnown RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 ATXN2Q99700 1313 aaKnown RBP13.35□□□□□ -0.27
PRPF39-202ENST00000424478 HMX2A2RU54 273 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CD6P30203 668 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 GPR1P46091 355 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 POLD2P49005 469 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 EIF3BP55884 814 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 RPL6Q02878 288 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 SGCGQ13326 291 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 LPAL2Q16609 132 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 DBN1Q16643 649 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 TMEM259Q4ZIN3 620 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 AFTPHQ6ULP2 937 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 NLRP9Q7RTR0 991 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 C1orf210Q8IVY1 113 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 DCAKDQ8WVC6 231 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 VPS18Q9P253 973 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CEP192Q8TEP8 1941 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 SLC7A4O43246 635 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CREB1P16220 341 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 FMO4P31512 558 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 PTGER3P43115 390 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CSE1LP55060 971 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 RPS21P63220 83 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 TPRG1LQ5T0D9 272 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 CMC1Q7Z7K0 106 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 GPATCH11Q8N954 259 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 MIR1-1HGQ9H1L0 117 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 GALPQ9UBC7 116 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 ZNF106Q9H2Y7 1883 aaKnown RBP13.34□□□□□ -0.27
PRPF39-202ENST00000424478 A0A1W2PPM1 405 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 OR2AG2A6NM03 316 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 S1PR4O95977 384 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 MSH2P43246 934 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 PIM3Q86V86 326 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 SGF29Q96ES7 293 aa13.34□□□□□ -0.27
PRPF39-202ENST00000424478 RASGRF2O14827 1237 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 AP1G1O43747 822 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 INHBAP08476 426 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 ABHD2P08910 425 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 NUDT17P0C025 328 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 AKT1P31749 480 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 IGFALSP35858 605 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 B4GALNT1Q00973 533 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 PDE1BQ01064 536 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 LRRC14Q15048 493 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 GPRC6AQ5T6X5 926 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 HEATR4Q86WZ0 1026 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SPATA6LQ8N4H0 392 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 OR2T34Q8NGX1 318 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 EIF2B4Q9UI10 523 aaKnown RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SCML1Q9UN30 329 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 H0Y858 1186 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 MAP3K13O43283 966 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SLC25A14O95258 325 aaPredicted RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 ITGALP20701 1170 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 CLCN5P51795 746 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 CBLBQ13191 982 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 ZNF549Q6P9A3 640 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SLC41A1Q8IVJ1 513 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 FBXL6Q8N531 539 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 TP53I13Q8NBR0 393 aaPredicted RBP13.33□□□□□ -0.28
PRPF39-202ENST00000424478 SLC44A1Q8WWI5 657 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 HSPA12BQ96MM6 686 aa13.33□□□□□ -0.28
PRPF39-202ENST00000424478 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms