RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 RTP3Q9BQQ7 232 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 TINF2Q9BSI4 451 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 AARSD1Q9BTE6 412 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 SIK2Q9H0K1 926 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 NOL6Q9H6R4 1146 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 RNF19AQ9NV58 838 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 RIC8BQ9NVN3 520 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 GMPR2Q9P2T1 348 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 SFMBT1Q9UHJ3 866 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 PAIP2BQ9ULR5 123 aaKnown RBP15.15■□□□□ 0.02
C9orf3-204ENST00000424143 AP3M1Q9Y2T2 418 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 COQ6Q9Y2Z9 468 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 PCDHGA11Q9Y5H2 935 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 PTPRDP23468 1912 aa15.15■□□□□ 0.02
C9orf3-204ENST00000424143 ATP6AP2A0A1C7CYW4 349 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 SYCE1LA8MT33 242 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 MAGEB3O15480 346 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ATP6AP2O75787 350 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 MLYCDO95822 493 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 GLP2RO95838 553 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ALBP02768 609 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 FGF1P05230 155 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ATXN1LP0C7T5 689 aaKnown RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UROSP10746 265 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ARSAP15289 507 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 CLCQ05315 142 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 GRB14Q14449 540 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 MARC1Q5VT66 337 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TTC23Q5W5X9 447 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 GTF2IRD2BQ6EKJ0 949 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ZNF549Q6P9A3 640 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 GTF2IRD2Q86UP8 949 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 METTL23Q86XA0 190 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 HID1Q8IV36 788 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ZNF683Q8IZ20 524 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TTC30BQ8N4P2 665 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 MINDY2Q8NBR6 621 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 BIRC7Q96CA5 298 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 CCDC115Q96NT0 180 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 SERPINB11Q96P15 392 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 SLC30A3Q99726 388 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 LRRC3Q9BY71 257 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 HPS4Q9NQG7 708 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 PRDM5Q9NQX1 630 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TMEM248Q9NWD8 314 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 USE1Q9NZ43 259 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 EGFL7Q9UHF1 273 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 HEMK1Q9Y5R4 338 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 A0A1W2PPW3 197 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 SLC22A3O75751 556 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 RPP40O75818 363 aaKnown RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 CHEK2O96017 543 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UGT1A6P19224 532 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UGT1A1P22309 533 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UGT1A4P22310 534 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UGT1A3P35503 534 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 UGT1A5P35504 534 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 PSEN2P49810 448 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ERVK-8P63133 956 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 DAG1Q14118 895 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 OR4D1Q15615 310 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TMEM26Q6ZUK4 368 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 NEK10Q6ZWH5 1172 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 RPS27LQ71UM5 84 aaKnown RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TFAP2DQ7Z6R9 452 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 MRPL10Q7Z7H8 261 aaKnown RBP15.14■□□□□ 0.01
C9orf3-204ENST00000424143 OR6P1Q8NGX9 317 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ARRDC2Q8TBH0 407 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 FAM110BQ8TC76 370 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 TANKQ92844 425 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 SLC39A13Q96H72 371 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 FBXL20Q96IG2 436 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 FEM1AQ9BSK4 669 aa15.14■□□□□ 0.01
C9orf3-204ENST00000424143 ZFC3H1O60293 1989 aaKnown RBP15.13■□□□□ 0.01
C9orf3-204ENST00000424143 IGLV3-10A0A075B6K4 115 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 FUOMA2VDF0 154 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 FAM149AA5PLN7 773 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 ASPDHA6ND91 283 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 ADM5C9JUS6 153 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 H0Y858 1186 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 CD3EAPO15446 510 aaKnown RBP15.13■□□□□ 0.01
C9orf3-204ENST00000424143 ZBTB11O95625 1053 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BCL10O95999 233 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 PBX3P40426 434 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BAG6P46379 1132 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BCAP31P51572 246 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 ARSDP51689 593 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BMXP51813 675 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 CDH13P55290 713 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 GSTM4Q03013 218 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 FGD3Q5JSP0 725 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 SIRPB2Q5JXA9 342 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
C9orf3-204ENST00000424143 FRA10AC1Q70Z53 315 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 THAP5Q7Z6K1 395 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 PJA1Q8NG27 643 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BRSK1Q8TDC3 778 aa15.13■□□□□ 0.01
C9orf3-204ENST00000424143 BTN2A3PQ96KV6 586 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms