RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 KATNA1O75449 491 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 SLC2A4P14672 509 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 DESP17661 470 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 HCAR3P49019 387 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 POLR2FP61218 127 aaKnown RBP16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 KIR2DS5Q14953 304 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 USP45Q70EL2 814 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 TP53INP2Q8IXH6 220 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 KCTD15Q96SI1 283 aaPredicted RBP16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 AGAP2Q99490 1192 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 MGME1Q9BQP7 344 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 TBC1D10AQ9BXI6 508 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 TWSG1Q9GZX9 223 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 UCK1Q9HA47 277 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 VPS18Q9P253 973 aa16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 CNOT8Q9UFF9 292 aaKnown RBP16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 OAS3Q9Y6K5 1087 aaKnown RBP16.57■□□□□ 0.24
CHCHD3-202ENST00000423635 A0A0U1RQS6 177 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 PIPSLA2A3N6 862 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 WIPF3A6NGB9 483 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 LILRA5A6NI73 299 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 NDUFA10O95299 355 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 CCNYL3P0C7X3 344 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 F3P13726 295 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 MAPK9P45984 424 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF135P52742 658 aaPredicted RBP16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF235Q14590 738 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 TCP11X2Q5H9J9 407 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 ARMC12Q5T9G4 340 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 LRRC66Q68CR7 880 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 DCUN1D2Q6PH85 259 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 CHST15Q7LFX5 561 aaPredicted RBP16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 RAVER1Q8IY67 606 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 ARFGAP1Q8N6T3 406 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 AVL9Q8NBF6 648 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 STAMBPL1Q96FJ0 436 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 TRIM55Q9BYV6 548 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF768Q9H5H4 540 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 OGFRQ9NZT2 677 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 CPNE7Q9UBL6 633 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 PADI1Q9ULC6 663 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 CRYBG3Q68DQ2 2970 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 SHANK1Q9Y566 2161 aa16.56■□□□□ 0.24
CHCHD3-202ENST00000423635 A1L4Q6 167 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 FZD6O60353 706 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 DNAJB5O75953 348 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 KIAA0754O94854 1291 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 ASMTLO95671 621 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 MT-ND3P03897 115 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 FGF5P12034 268 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF30P17039 623 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 CTPS1P17812 591 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 GARSP41250 739 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 KLK7P49862 253 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 GFERP55789 205 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 SH3BP2P78314 561 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 NADK2Q4G0N4 442 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 PAPD7Q5XG87 772 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 TICAM1Q8IUC6 712 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 PSTKQ8IV42 348 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 NDUFAF2Q8N183 169 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 SEC14L1Q92503 715 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 OR6C1Q96RD1 312 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 SNRNP25Q9BV90 132 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 RMI1Q9H9A7 625 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 CNOT6Q9ULM6 557 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 PRKAB1Q9Y478 270 aa16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 PCDHGA9Q9Y5G4 932 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-202ENST00000423635 MED13Q9UHV7 2174 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 C21orf140B9A014 251 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 EPHB6O15197 1021 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 PDHA1P08559 390 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 CLCNKAP51800 687 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 UBE2IP63279 158 aaKnown RBP16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 DNASE1L3Q13609 305 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 DPYSQ14117 519 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 ZNF787Q6DD87 383 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 MAMDC2Q7Z304 686 aaPredicted RBP16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 RASGRP3Q8IV61 690 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 MCOLN2Q8IZK6 566 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 BBS5Q8N3I7 341 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 THAP4Q8WY91 577 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 PEBP4Q96S96 227 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 RIOK2Q9BVS4 552 aaKnown RBP16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 LHX9Q9NQ69 397 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 KCNK6Q9Y257 313 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 LRBAP50851 2863 aa16.54■□□□□ 0.24
CHCHD3-202ENST00000423635 MAFKO60675 156 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 SPAG6O75602 509 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 XRCC1P18887 633 aaPredicted RBP16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 DCTP40126 519 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 STC1P52823 247 aa16.53■□□□□ 0.24
CHCHD3-202ENST00000423635 MAXP61244 160 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms