RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SLC12A3P55017 1021 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 HERC3Q15034 1050 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 PRAMEF19Q5SWL8 479 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 TMEM53Q6P2H8 277 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 SLC22A16Q86VW1 577 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 P2RY8Q86VZ1 359 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 SLITRK4Q8IW52 837 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 ZNF354BQ96LW1 612 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 FERD3LQ96RJ6 166 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 NPAS2Q99743 824 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 TMEM216Q9P0N5 145 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 FADS3Q9Y5Q0 445 aa11.09□□□□□ -0.63
TNC-203ENST00000423613 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 HACD1B0YJ81 288 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PSMD9O00233 223 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 AIREO43918 545 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 LRIG2O94898 1065 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SCGB1D2O95969 90 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PAEPP09466 180 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SNAPC1Q16533 368 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 GPAT3Q53EU6 434 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 REPS2Q8NFH8 660 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ARMC5Q96C12 935 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 TMCO6Q96DC7 493 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 UPB1Q9UBR1 384 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 E9PAM4 449 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 EML1O00423 815 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 NTSP30990 170 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 FMO4P31512 558 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 MTHFRP42898 656 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 MC1RQ01726 317 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 CREMQ03060 361 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 NAB1Q13506 487 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 HYIQ5T013 277 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ZNF548Q8NEK5 533 aaPredicted RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 C12orf66Q96MD2 445 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 BRD9Q9H8M2 597 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SLC39A1Q9NY26 324 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ZNF639Q9UID6 485 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 PEX16Q9Y5Y5 336 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 TISP43B9A030 160 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 E5RJQ4 531 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 F8VP50 259 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 NAE1Q13564 534 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SSX2Q16385 188 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ZCCHC12Q6PEW1 402 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 CLPTM1LQ96KA5 538 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SSX3Q99909 188 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SLC22A4Q9H015 551 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ABCG8Q9H221 673 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SUCOQ9UBS9 1254 aaKnown RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 APOC4-APOC2K7ER74 178 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ZBTB14O43829 449 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 APOC2P02655 101 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 BDNFP23560 247 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 CXCL9Q07325 125 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PRKG2Q13237 762 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 WDR59Q6PJI9 974 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PGM2Q96G03 612 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 TBC1D14Q9P2M4 693 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 GTPBP1O00178 669 aaKnown RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 BCKDKO14874 412 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 NR2F6P10588 404 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 CCNB1P14635 433 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PFKPQ01813 784 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
TNC-203ENST00000423613 GHDCQ8N2G8 530 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 PQLC1Q8N2U9 271 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 ASB7Q9H672 318 aa11.08□□□□□ -0.64
TNC-203ENST00000423613 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 M0QX08 132 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 FNTBP49356 437 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 CSTF1Q05048 431 aaKnown RBP11.07□□□□□ -0.64
TNC-203ENST00000423613 ILF3Q12906 894 aaKnown RBP eCLIP11.07□□□□□ -0.64
TNC-203ENST00000423613 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
TNC-203ENST00000423613 MEA1Q16626 185 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 IDNKQ5T6J7 187 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 KLHDC10Q6PID8 442 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 KATNAL2Q8IYT4 538 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 TSEN15Q8WW01 171 aaKnown RBP11.07□□□□□ -0.64
TNC-203ENST00000423613 RAD51AP1Q96B01 352 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 DEFB118Q96PH6 123 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 TUBG2Q9NRH3 451 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 FARSBQ9NSD9 589 aaKnown RBP11.07□□□□□ -0.64
TNC-203ENST00000423613 SPATA7Q9P0W8 599 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
TNC-203ENST00000423613 ACKR2O00590 384 aa11.07□□□□□ -0.64
TNC-203ENST00000423613 CALCAP01258 141 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms