RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 B3GALT1Q9Y5Z6 326 aa16.03■□□□□ 0.16
COL18A1-205ENST00000423214 TRBV23OR9-2A0A075B6M9 112 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 A0A087X0T9 212 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CLDN7O95471 211 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
COL18A1-205ENST00000423214 HLA-DQB2P05538 268 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 FAM228BP0C875 321 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 MX2P20592 715 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CCNCP24863 283 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 MAN1A1P33908 653 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 RPL26P61254 145 aaKnown RBP16.02■□□□□ 0.16
COL18A1-205ENST00000423214 ZBED6P86452 979 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 NFKB2Q00653 900 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 SQSTM1Q13501 440 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 PDK2Q15119 407 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 ANKRD20A8PQ5CZ79 823 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 SNAP47Q5SQN1 464 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 DCAF12Q5T6F0 453 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 TMEM71Q6P5X7 295 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 ATG14Q6ZNE5 492 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 NLRP8Q86W28 1048 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 MAP7D3Q8IWC1 876 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 RAVER1Q8IY67 606 aaKnown RBP16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CACNA2D3Q8IZS8 1091 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CCNYQ8ND76 341 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 FAM71BQ8TC56 605 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CCHCR1Q8TD31 782 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 NKD1Q969G9 470 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 TEFMQ96QE5 360 aaKnown RBP16.02■□□□□ 0.16
COL18A1-205ENST00000423214 CTTNBP2NLQ9P2B4 639 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 RPL26L1Q9UNX3 145 aaKnown RBP16.02■□□□□ 0.16
COL18A1-205ENST00000423214 PRKAB1Q9Y478 270 aa16.02■□□□□ 0.16
COL18A1-205ENST00000423214 B4E171 279 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 ACP5P13686 325 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 IL4RP24394 825 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 UGT1A3P35503 534 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 TSPAN7P41732 249 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 MAPK9P45984 424 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 NFATC2Q13469 925 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
COL18A1-205ENST00000423214 FATE1Q969F0 183 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 SH3KBP1Q96B97 665 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 TSGA13Q96PP4 275 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 HERPUD2Q9BSE4 406 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
COL18A1-205ENST00000423214 OCIAD1Q9NX40 245 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 KCNK6Q9Y257 313 aa16.01■□□□□ 0.15
COL18A1-205ENST00000423214 OAS3Q9Y6K5 1087 aaKnown RBP16.01■□□□□ 0.15
COL18A1-205ENST00000423214 PTPN13Q12923 2485 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 RAD1O60671 282 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 SNX2O60749 519 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 DNAJC6O75061 913 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 KRT7P08729 469 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 LIFP15018 202 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 NOP2P46087 812 aaKnown RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 SPINT3P49223 89 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 CSRP3P50461 194 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 ARSDP51689 593 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 ARSEP51690 589 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 ATP13A4Q4VNC1 1196 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 HENMT1Q5T8I9 393 aaKnown RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 ANKS6Q68DC2 871 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 BORAQ6PGQ7 559 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 SLC9B2Q86UD5 537 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 PHYKPLQ8IUZ5 450 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 CCDC13Q8IYE1 715 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 ARRDC2Q8TBH0 407 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 CTNNBL1Q8WYA6 563 aaPredicted RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 KIAA1143Q96AT1 154 aaPredicted RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 HDAC11Q96DB2 347 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 LYSMD1Q96S90 227 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 MLPHQ9BV36 600 aaPredicted RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 SLC12A9Q9BXP2 914 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 ADGRE3Q9BY15 652 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 RMI1Q9H9A7 625 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 SARS2Q9NP81 518 aaKnown RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 CAPN11Q9UMQ6 739 aa16■□□□□ 0.15
COL18A1-205ENST00000423214 LUC7L2Q9Y383 392 aaKnown RBP16■□□□□ 0.15
COL18A1-205ENST00000423214 ZNF891A8MT65 544 aaPredicted RBP15.99■□□□□ 0.15
COL18A1-205ENST00000423214 A8MU76 341 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 FADS2P1A8MWK0 482 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 PROSCO94903 275 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 EML2O95834 649 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 PRLP01236 227 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 ITGB6P18564 788 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 CD86P42081 329 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 EPHA4P54764 986 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 GBE1Q04446 702 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 NIPAL4Q0D2K0 466 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 CLCA4Q14CN2 919 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 ZNF569Q5MCW4 686 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 WDR74Q6RFH5 385 aaPredicted RBP15.99■□□□□ 0.15
COL18A1-205ENST00000423214 CEACAM20Q6UY09 585 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 LYSMD3Q7Z3D4 306 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 CPNE8Q86YQ8 564 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 AVL9Q8NBF6 648 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 LRRN4Q8WUT4 740 aa15.99■□□□□ 0.15
COL18A1-205ENST00000423214 NCSTNQ92542 709 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms