RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 EIF1ADQ8N9N8 165 aaKnown RBP17.42■□□□□ 0.38
LINC00271-201ENST00000421378 OR13H1Q8NG92 308 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 ZNF398Q8TD17 642 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 PYROXD1Q8WU10 500 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 SKA1Q96BD8 255 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 CFAP36Q96G28 342 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 KLHDC7BQ96G42 594 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 FCRL3Q96P31 734 aaPredicted RBP17.42■□□□□ 0.38
LINC00271-201ENST00000421378 VPS35Q96QK1 796 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 APOOQ9BUR5 198 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 TEX101Q9BY14 249 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 ASB8Q9H765 288 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 PHPT1Q9NRX4 125 aaPredicted RBP17.42■□□□□ 0.38
LINC00271-201ENST00000421378 LAMA1P25391 3075 aa17.42■□□□□ 0.38
LINC00271-201ENST00000421378 ZCWPW2A0A1B0GU75 182 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 A0A1W2PR77 199 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 OR51F1A6NGY5 319 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 INPP4BO15327 924 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 VAPBO95292 243 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 GOT2P00505 430 aaKnown RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 WNT1P04628 370 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 MYCLP1P12525 358 aaPredicted RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 ARNTP27540 789 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 TNFRSF8P28908 595 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 CSNK1EP49674 416 aaKnown RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 THOP1P52888 689 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 PDE1CQ14123 709 aaPredicted RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 ZRANB3Q5FWF4 1079 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 SPANXN3Q5MJ09 141 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 PHYKPLQ8IUZ5 450 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 OR4L1Q8NH43 312 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 CEP76Q8TAP6 659 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 GLYATL1Q969I3 302 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 FUBP1Q96AE4 644 aaKnown RBP17.41■□□□□ 0.38
LINC00271-201ENST00000421378 HIC2Q96JB3 615 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 LGR4Q9BXB1 951 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 ARRDC1-AS1Q9H2J1 176 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 SMOXQ9NWM0 555 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 GMEB2Q9UKD1 530 aa17.41■□□□□ 0.38
LINC00271-201ENST00000421378 VILLO15195 856 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A9O60656 530 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 MAGEC1O60732 1142 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 SLC25A14O95258 325 aaPredicted RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 LMNAP02545 664 aaKnown RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 CFIP05156 583 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 RETP07949 1114 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A6P19224 532 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A1P22309 533 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A4P22310 534 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 HTR1BP28222 390 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A3P35503 534 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A5P35504 534 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 C21orf59P57076 290 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 CACNG1Q06432 222 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 DUOXA1Q1HG43 343 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 GPR33Q49SQ1 333 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UNC5AQ6ZN44 842 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 SLC22A18ASQ8N1D0 253 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 BTN2A2Q8WVV5 523 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A7Q9HAW7 530 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A10Q9HAW8 530 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 UGT1A8Q9HAW9 530 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 GPR27Q9NS67 375 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 CRLS1Q9UJA2 301 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 AGAP14A8MT82 685 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 TLR4O00206 839 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 HOXC4P09017 264 aaPredicted RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 FOXN2P32314 431 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 MAGEA4P43358 317 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 ARCN1P48444 511 aaKnown RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 KIAA1024LP59773 190 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 PTK2BQ14289 1009 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 NFATC4Q14934 902 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 SMAD1Q15797 465 aaKnown RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 LONRF1Q17RB8 773 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 STEAP4Q687X5 459 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 MICALCLQ6ZW33 695 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 TRIM74Q86UV6 250 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 GSPT2Q8IYD1 628 aaKnown RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 GDAP1Q8TB36 358 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 ULK4Q96C45 1275 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 COX14Q96I36 57 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 C9orf72Q96LT7 481 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 FAM96AQ9H5X1 160 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 CATSPERZQ9NTU4 200 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 IL1RAPL1Q9NZN1 696 aa17.4■□□□□ 0.38
LINC00271-201ENST00000421378 CNOT6Q9ULM6 557 aaKnown RBP17.4■□□□□ 0.38
LINC00271-201ENST00000421378 GOLGA8KD6RF30 607 aa17.39■□□□□ 0.37
LINC00271-201ENST00000421378 GOLGA8TH3BQL2 631 aa17.39■□□□□ 0.37
LINC00271-201ENST00000421378 MYBL2P10244 700 aa17.39■□□□□ 0.37
LINC00271-201ENST00000421378 KELP23276 732 aa17.39■□□□□ 0.37
LINC00271-201ENST00000421378 VSNL1P62760 191 aa17.39■□□□□ 0.37
LINC00271-201ENST00000421378 FASTKD1Q53R41 847 aaKnown RBP17.39■□□□□ 0.37
LINC00271-201ENST00000421378 TRIM61Q5EBN2 209 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms