RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 C1SP09871 688 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 MYL2P10916 166 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 TIMP2P16035 220 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 ZNF37AP17032 561 aaPredicted RBP20.84■□□□□ 0.93
GPC1-202ENST00000420138 GRK2P25098 689 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 SLC1A6P48664 564 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 POLR2LP62875 67 aaKnown RBP20.84■□□□□ 0.93
GPC1-202ENST00000420138 SETDB1Q15047 1291 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 HSF5Q4G112 596 aaPredicted RBP20.84■□□□□ 0.93
GPC1-202ENST00000420138 AGAP9Q5VTM2 703 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 SNX20Q7Z614 316 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 PPP1R14CQ8TAE6 165 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 LRIG1Q96JA1 1093 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 TRIM55Q9BYV6 548 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 SLC40A1Q9NP59 571 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 CD207Q9UJ71 328 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 APPL1Q9UKG1 709 aa20.84■□□□□ 0.93
GPC1-202ENST00000420138 SPTBN5Q9NRC6 3674 aaKnown RBP20.84■□□□□ 0.93
GPC1-202ENST00000420138 GLYATL1P3A0A0U1RQE8 302 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 AGAP14A8MT82 685 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 TRIM13O60858 407 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 RASSF9O75901 435 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 DCTN3O75935 186 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 PKMP14618 531 aaKnown RBP20.83■□□□□ 0.93
GPC1-202ENST00000420138 SPAM1P38567 509 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 PTGER3P43115 390 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 ST8SIA6P61647 398 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 ACAP2Q15057 778 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 CHRNA6Q15825 494 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 CERS6Q6ZMG9 384 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 TAS2R42Q7RTR8 314 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 YAF2Q8IY57 180 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 FAM136AQ96C01 138 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 GATA5Q9BWX5 397 aaPredicted RBP20.83■□□□□ 0.93
GPC1-202ENST00000420138 OSBPL1AQ9BXW6 950 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 TMEM245Q9H330 911 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 DCTN4Q9UJW0 460 aa20.83■□□□□ 0.93
GPC1-202ENST00000420138 OAS3Q9Y6K5 1087 aaKnown RBP20.83■□□□□ 0.93
GPC1-202ENST00000420138 MUC22E2RYF6 1773 aaPredicted RBP20.83■□□□□ 0.93
GPC1-202ENST00000420138 KIAA1549LQ6ZVL6 1849 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 H3BQ06 376 aaPredicted RBP20.83■□□□□ 0.92
GPC1-202ENST00000420138 UGT1A6P19224 532 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 CD9P21926 228 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 UGT1A1P22309 533 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 UGT1A4P22310 534 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 UGT1A3P35503 534 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 UGT1A5P35504 534 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 KCNC1P48547 511 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 PTPN5P54829 565 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 PFKPQ01813 784 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 HNRNPA1L2Q32P51 320 aaKnown RBP20.83■□□□□ 0.92
GPC1-202ENST00000420138 ZNF805Q5CZA5 627 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 C9orf64Q5T6V5 341 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 ISCA2Q86U28 154 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 SERPINA9Q86WD7 417 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 MOCOSQ96EN8 888 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 SLC30A3Q99726 388 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 ASB8Q9H765 288 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 DKK3Q9UBP4 350 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 SARDHQ9UL12 918 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 FAM50BQ9Y247 325 aa20.83■□□□□ 0.92
GPC1-202ENST00000420138 SCN8AQ9UQD0 1980 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 CFAP73A6NFT4 308 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 NIPSNAP2O75323 286 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 RHOBTB1O94844 696 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 HLA-EP13747 358 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 CD1DP15813 335 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 ABCE1P61221 599 aaKnown RBP20.82■□□□□ 0.92
GPC1-202ENST00000420138 NCALDP61601 193 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 ZNF234Q14588 700 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 LIPMQ5VYY2 423 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 PAQR3Q6TCH7 311 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 GIMAP7Q8NHV1 300 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 PTERQ96BW5 349 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 TAS2R13Q9NYV9 303 aa20.82■□□□□ 0.92
GPC1-202ENST00000420138 H3BMM5 538 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 PFDN6O15212 129 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 GDI1P31150 447 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 KPNA2P52292 529 aaKnown RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 PRPF38BQ5VTL8 546 aaKnown RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 CRLF3Q8IUI8 442 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 STK40Q8N2I9 435 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 TXNDC5Q8NBS9 432 aaKnown RBP20.81■□□□□ 0.92
GPC1-202ENST00000420138 HCAR2Q8TDS4 363 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 SGF29Q96ES7 293 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 LRRC37BQ96QE4 947 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 GPR21Q99679 349 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 BOCQ9BWV1 1114 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 PCDH12Q9NPG4 1184 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 NUMBLQ9Y6R0 609 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 UPK3BL1B0FP48 263 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 UPK3BL2E5RIL1 263 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 ZBTB14O43829 449 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 ECI2O75521 394 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 ESR1P03372 595 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 TFEBP19484 476 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 ITGALP20701 1170 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 KCNA5P22460 613 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 SPINT3P49223 89 aa20.81■□□□□ 0.92
GPC1-202ENST00000420138 METAP1P53582 386 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms