RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 TOR4AQ9NXH8 423 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 SPASTQ9UBP0 616 aa18.51■□□□□ 0.55
PTCD3-204ENST00000418628 LY6G6EA0A0G2JKS1 128 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 MROH6A6NGR9 719 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 LMO7DNF2Z398 122 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 H7C0S8 307 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 TPP1O14773 563 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 INPP4BO15327 924 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 BUD23O43709 281 aaKnown RBP18.5■□□□□ 0.55
PTCD3-204ENST00000418628 DNAJC6O75061 913 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 CRTAMO95727 393 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 KRT14P02533 472 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 CELA2BP08218 269 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-204ENST00000418628 CA5AP35218 305 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 XIAPP98170 497 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 CDK16Q00536 496 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 PROX2Q3B8N5 592 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 ATP13A5Q4VNC0 1218 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 PRRT3Q5FWE3 981 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 SYT10Q6XYQ8 523 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 HID1Q8IV36 788 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 SDR16C5Q8N3Y7 309 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 OR4K2Q8NGD2 314 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 OR13C4Q8NGS5 318 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 RHBDD1Q8TEB9 315 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 GRK7Q8WTQ7 553 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 SETD7Q8WTS6 366 aaKnown RBP18.5■□□□□ 0.55
PTCD3-204ENST00000418628 GLYATL1Q969I3 302 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 RANBP9Q96S59 729 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 SLC13A1Q9BZW2 595 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 PIH1D1Q9NWS0 290 aaKnown RBP18.5■□□□□ 0.55
PTCD3-204ENST00000418628 RIMKLBQ9ULI2 386 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 PKP3Q9Y446 797 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 PCYT1BQ9Y5K3 369 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-204ENST00000418628 U3KQA8 63 aa18.5■□□□□ 0.55
PTCD3-204ENST00000418628 GLYATL1P3A0A0U1RQE8 302 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 STX7O15400 261 aaKnown RBP18.49■□□□□ 0.55
PTCD3-204ENST00000418628 PTGIRP43119 386 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 BASP1P80723 227 aaKnown RBP18.49■□□□□ 0.55
PTCD3-204ENST00000418628 PEX6Q13608 980 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 TRIP13Q15645 432 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-204ENST00000418628 PPM1JQ5JR12 505 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 DGLUCYQ7Z3D6 616 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 EID2Q8N6I1 236 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 FAM181AQ8N9Y4 354 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 CDC6Q99741 560 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 BOCQ9BWV1 1114 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 NLE1Q9NVX2 485 aaPredicted RBP18.49■□□□□ 0.55
PTCD3-204ENST00000418628 TRNAU1APQ9NX07 287 aaKnown RBP18.49■□□□□ 0.55
PTCD3-204ENST00000418628 SUFUQ9UMX1 484 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 ST14Q9Y5Y6 855 aa18.49■□□□□ 0.55
PTCD3-204ENST00000418628 TCRBV7S3A2A0A539 114 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 NEMP2A6NFY4 417 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 E7EVH7 732 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 CCDC188H7C350 402 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 GPR39O43194 453 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 SIGLEC6O43699 453 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TMEM63AO94886 807 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 ECEL1O95672 775 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 GAS8O95995 478 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TNFP01375 233 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TPH1P17752 444 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 POLD2P49005 469 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 ACVR1Q04771 509 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 GPS1Q13098 491 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 PTK6Q13882 451 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 POU6F1Q14863 301 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
PTCD3-204ENST00000418628 CHRNA6Q15825 494 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 KIF26BQ2KJY2 2108 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 KHDC1Q4VXA5 237 aaKnown RBP18.48■□□□□ 0.55
PTCD3-204ENST00000418628 PYCR3Q53H96 274 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 FAM151BQ6UXP7 276 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 DDHD1Q8NEL9 900 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 GPBAR1Q8TDU6 330 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 LMX1AQ8TE12 382 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 CPT1BQ92523 772 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 DNAJC1Q96KC8 554 aaKnown RBP18.48■□□□□ 0.55
PTCD3-204ENST00000418628 DUSP23Q9BVJ7 150 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TMEM168Q9H0V1 697 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 FTSJ1Q9UET6 329 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 FKBPLQ9UIM3 349 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TMEM98Q9Y2Y6 226 aa18.48■□□□□ 0.55
PTCD3-204ENST00000418628 TRBV5-4A0A0C4DH59 114 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 GPR89AB7ZAQ6 455 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 CHUKO15111 745 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 FFAR2O15552 330 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 PRAMEF1O95521 474 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 GPR89BP0CG08 455 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 CASQ1P31415 396 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 HADHAP40939 763 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 C1orf61Q13536 156 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 ITGA9Q13797 1035 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 ELOCQ15369 112 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 CERCAMQ5T4B2 595 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 ANKRD22Q5VYY1 191 aa18.47■□□□□ 0.55
PTCD3-204ENST00000418628 DOK6Q6PKX4 331 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms