RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 MICALCLQ6ZW33 695 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 SLC25A45Q8N413 288 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 EID2Q8N6I1 236 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 OR4K2Q8NGD2 314 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 BAHD1Q8TBE0 780 aaPredicted RBP12.39□□□□□ -0.43
SKA1-203ENST00000417656 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 LMX1AQ8TE12 382 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 RHBDD1Q8TEB9 315 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 BTN2A2Q8WVV5 523 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 COX14Q96I36 57 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 DNAJC1Q96KC8 554 aaKnown RBP12.39□□□□□ -0.43
SKA1-203ENST00000417656 SLC13A1Q9BZW2 595 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 CARS2Q9HA77 564 aaKnown RBP12.39□□□□□ -0.43
SKA1-203ENST00000417656 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 IL26Q9NPH9 171 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 SPASTQ9UBP0 616 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 CNOT6Q9ULM6 557 aaKnown RBP12.39□□□□□ -0.43
SKA1-203ENST00000417656 TMEM98Q9Y2Y6 226 aa12.39□□□□□ -0.43
SKA1-203ENST00000417656 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 CBFA2T3O75081 653 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 TMEM63AO94886 807 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 ASMTLO95671 621 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 TPSB2P20231 275 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 GNPDA1P46926 289 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 BLKP51451 505 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 PTK6Q13882 451 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 KCNJ11Q14654 390 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 TPSAB1Q15661 275 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 CHRNA6Q15825 494 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 ATP13A5Q4VNC0 1218 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 CERCAMQ5T4B2 595 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 ZNF648Q5T619 568 aaPredicted RBP12.38□□□□□ -0.43
SKA1-203ENST00000417656 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 ZDHHC20Q5W0Z9 365 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 PDPK2PQ6A1A2 396 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 ZNF534Q76KX8 674 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
SKA1-203ENST00000417656 PHYKPLQ8IUZ5 450 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 CPT1BQ92523 772 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 CLPBQ9H078 707 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 SLC32A1Q9H598 525 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 RNF14Q9UBS8 474 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 PCYOX1Q9UHG3 505 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 TMPRSS11EQ9UL52 423 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 SLC17A4Q9Y2C5 497 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
SKA1-203ENST00000417656 SPTBN4Q9H254 2564 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 CCDC188H7C350 402 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 TRIM38O00635 465 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 PPFIA2O75334 1257 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 MTX2O75431 263 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 KCNK5O95279 499 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 TNFP01375 233 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 FUCA1P04066 466 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 IVLP07476 585 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 GIMD1P0DJR0 217 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 CTSEP14091 401 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 CA5AP35218 305 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 PTGIRP43119 386 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 MAGEA6P43360 314 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
SKA1-203ENST00000417656 PDE1BQ01064 536 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 KHDC1Q4VXA5 237 aaKnown RBP12.37□□□□□ -0.43
SKA1-203ENST00000417656 PPM1JQ5JR12 505 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 DGLUCYQ7Z3D6 616 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
SKA1-203ENST00000417656 SLCO2A1Q92959 643 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 TBATAQ96M53 351 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 ASIC3Q9UHC3 531 aa12.37□□□□□ -0.43
SKA1-203ENST00000417656 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
SKA1-203ENST00000417656 DCHS1Q96JQ0 3298 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 HEATR9A2RTY3 570 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 MROH6A6NGR9 719 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 SIGLEC6O43699 453 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A9O60656 530 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 SRP72O76094 671 aaKnown RBP12.36□□□□□ -0.43
SKA1-203ENST00000417656 SLC25A14O95258 325 aaPredicted RBP12.36□□□□□ -0.43
SKA1-203ENST00000417656 ALPPL2P10696 532 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A6P19224 532 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A1P22309 533 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A4P22310 534 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 MC4RP32245 332 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A3P35503 534 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 UGT1A5P35504 534 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 CRADDP78560 199 aa12.36□□□□□ -0.43
SKA1-203ENST00000417656 XIAPP98170 497 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms