RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 INPP4BO15327 924 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 HADHBP55084 474 aaKnown RBP25.14■■□□□ 1.62
VEGFA-208ENST00000417285 ZBTB17Q13105 803 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 TMEM164Q5U3C3 297 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 MARK2Q7KZI7 788 aaKnown RBP25.14■■□□□ 1.62
VEGFA-208ENST00000417285 BZW1Q7L1Q6 419 aaKnown RBP25.14■■□□□ 1.62
VEGFA-208ENST00000417285 TMPRSS9Q7Z410 1059 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 TRIM74Q86UV6 250 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 CCDC170Q8IYT3 715 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 OLFM3Q96PB7 478 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 RDH14Q9HBH5 336 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 LUC7LQ9NQ29 371 aaKnown RBP25.14■■□□□ 1.62
VEGFA-208ENST00000417285 RAD18Q9NS91 495 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 CNOT6Q9ULM6 557 aaKnown RBP25.14■■□□□ 1.62
VEGFA-208ENST00000417285 PLEKHM1Q9Y4G2 1056 aa25.14■■□□□ 1.62
VEGFA-208ENST00000417285 PPM1DO15297 605 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 PSTPIP1O43586 416 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 TRA2AQ13595 282 aaKnown RBP eCLIP25.13■■□□□ 1.611e-8■■□□□ 12.8
VEGFA-208ENST00000417285 SPA17Q15506 151 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 HENMT1Q5T8I9 393 aaKnown RBP25.13■■□□□ 1.61
VEGFA-208ENST00000417285 NPNTQ6UXI9 565 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 NT5DC3Q86UY8 548 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 IMP4Q96G21 291 aaKnown RBP25.13■■□□□ 1.61
VEGFA-208ENST00000417285 WDR24Q96S15 920 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 SLC25A51Q9H1U9 297 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 SEPT10Q9P0V9 454 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 PIEZO2Q9H5I5 2752 aa25.13■■□□□ 1.61
VEGFA-208ENST00000417285 DNAJC6O75061 913 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 LCA5LO95447 670 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 PRB1P04280 392 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 CD82P27701 267 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 CYLC1P35663 651 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-208ENST00000417285 FASLGP48023 281 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 NR2C2P49116 596 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 DYNLT1P63172 113 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 TFDP2Q14188 446 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 SLC14A2Q15849 920 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 CCDC70Q6NSX1 233 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 PCSK4Q6UW60 755 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 MFSD7Q6UXD7 560 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 ZNF574Q6ZN55 896 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-208ENST00000417285 OR4D9Q8NGE8 314 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 PATE1Q8WXA2 126 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 SRPK1Q96SB4 655 aaKnown RBP25.12■■□□□ 1.61
VEGFA-208ENST00000417285 ZFYVE1Q9HBF4 777 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 MAGEE1Q9HCI5 957 aa25.12■■□□□ 1.61
VEGFA-208ENST00000417285 ATP1A1P05023 1023 aaKnown RBP25.11■■□□□ 1.61
VEGFA-208ENST00000417285 LIPCP11150 499 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 ITIH1P19827 911 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 LIMK2P53671 638 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 GPLD1P80108 840 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 SFRP1Q8N474 314 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 USP7Q93009 1102 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 AGAP3Q96P47 875 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 TRIB3Q96RU7 358 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 NUDT22Q9BRQ3 303 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 KCNK4Q9NYG8 393 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 PCDHA13Q9Y5I0 950 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 ALG6Q9Y672 507 aa25.11■■□□□ 1.61
VEGFA-208ENST00000417285 ZNF462Q96JM2 2506 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 IGHV1OR21-1A0A087WYE8 117 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 IGHV5-10-1A0A0J9YXX1 117 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 CDKN2BP42772 138 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 MAPK10P53779 464 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 CFHR1Q03591 330 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 CDK18Q07002 472 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 C16orf72Q14CZ0 275 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 TEX44Q53QW1 395 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 CHST15Q7LFX5 561 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-208ENST00000417285 CEP41Q9BYV8 373 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 PCDHB11Q9Y5F2 797 aa25.1■■□□□ 1.61
VEGFA-208ENST00000417285 A0A0A6YYK5 440 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-208ENST00000417285 PRAMEF33A0A0G2JMD5 474 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 PRAMEF10O60809 474 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 C1QL1O75973 258 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 SLC2A4P14672 509 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 TAZQ16635 292 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 LYSMD3Q7Z3D4 306 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 TTC9Q92623 222 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 SH3KBP1Q96B97 665 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 TADA1Q96BN2 335 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 MRFAP1L1Q96HT8 127 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 ZSCAN5AQ9BUG6 496 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 CARD9Q9H257 536 aa25.09■■□□□ 1.61
VEGFA-208ENST00000417285 OAS3Q9Y6K5 1087 aaKnown RBP25.09■■□□□ 1.61
VEGFA-208ENST00000417285 FADS2P1A8MWK0 482 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 GPR89AB7ZAQ6 455 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 GPR89BP0CG08 455 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 ETV5P41161 510 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 ZNF75DP51815 510 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 DCDC1P59894 354 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 GALNT3Q14435 633 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 NKAIN2Q5VXU1 208 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 PDPK2PQ6A1A2 396 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 IYDQ6PHW0 289 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 SPOCD1Q6ZMY3 1216 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 KDELC2Q7Z4H8 507 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 TMC3Q7Z5M5 1100 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 AGBL5Q8NDL9 886 aa25.08■■□□□ 1.61
VEGFA-208ENST00000417285 CCDC112Q8NEF3 446 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms