RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DOLKQ9UPQ8 538 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 BTBD3Q9Y2F9 522 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 NEU2Q9Y3R4 380 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 CEP250Q9BV73 2442 aa22.92■■□□□ 1.26
SMARCB1-205ENST00000417137 HEATR9A2RTY3 570 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 LDB2O43679 373 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 CBFA2T3O75081 653 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 IVLP07476 585 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 TRIP6Q15654 476 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 SKIDA1Q1XH10 827 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 FAM151BQ6UXP7 276 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 PHYKPLQ8IUZ5 450 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 KLHL7Q8IXQ5 586 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 STYXQ8WUJ0 223 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 PDXPQ96GD0 296 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 VPS35Q96QK1 796 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 LRRC61Q9BV99 259 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 TCEAL2Q9H3H9 227 aaPredicted RBP22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 RMI1Q9H9A7 625 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 CARS2Q9HA77 564 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 TRIM39Q9HCM9 518 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 MRPL40Q9NQ50 206 aaKnown RBP22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 NLGN3Q9NZ94 848 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 TMEM98Q9Y2Y6 226 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 KCTD3Q9Y597 815 aa22.91■■□□□ 1.26
SMARCB1-205ENST00000417137 TPP1O14773 563 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ANXA6P08133 673 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ADRA1DP25100 572 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ADCY8P40145 1251 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 GRIA1P42261 906 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 MAGEA6P43360 314 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 NPY2RP49146 381 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ZNF140P52738 457 aaPredicted RBP22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 C1orf61Q13536 156 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 PTPRCAPQ14761 206 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 CHRNA6Q15825 494 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ATP13A5Q4VNC0 1218 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 CERCAMQ5T4B2 595 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 LVRNQ6Q4G3 990 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 NLRP9Q7RTR0 991 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 TRIM74Q86UV6 250 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 GKN2Q86XP6 184 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 OR4C6Q8NH72 309 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 ZNF398Q8TD17 642 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 SCARF2Q96GP6 870 aaPredicted RBP22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 RANBP9Q96S59 729 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 BFARQ9NZS9 450 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 FTSJ1Q9UET6 329 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 SUFUQ9UMX1 484 aa22.9■■□□□ 1.26
SMARCB1-205ENST00000417137 GPR89AB7ZAQ6 455 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 LMO7DNF2Z398 122 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 FFAR2O15552 330 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 LDOC1O95751 146 aaPredicted RBP22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 GPR89BP0CG08 455 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 GNPDA1P46926 289 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 POLD2P49005 469 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 DR1Q01658 176 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 PSAPL1Q6NUJ1 521 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 LRRC8BQ6P9F7 803 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 OR13C4Q8NGS5 318 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 GDAP1Q8TB36 358 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 NLE1Q9NVX2 485 aaPredicted RBP22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 TRNAU1APQ9NX07 287 aaKnown RBP22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 ASIC3Q9UHC3 531 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 FKBPLQ9UIM3 349 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 TMEM131Q92545 1883 aa22.89■■□□□ 1.25
SMARCB1-205ENST00000417137 MROH6A6NGR9 719 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 TNFSF14O43557 240 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 VEGFDO43915 354 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 SRP72O76094 671 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PRAMEF1O95521 474 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 KCNA4P22459 653 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 TERF1P54274 439 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 TMPRSS15P98073 1019 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PEX6Q13608 980 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PTK6Q13882 451 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 KCNJ11Q14654 390 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PPM1JQ5JR12 505 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 LDLRAP1Q5SW96 308 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PCGF5Q86SE9 256 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 GLRX5Q86SX6 157 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 GALNT13Q8IUC8 556 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 PPHLN1Q8NEY8 458 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 BAHD1Q8TBE0 780 aaPredicted RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 CPT1BQ92523 772 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 GLMNQ92990 594 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 DNAJC1Q96KC8 554 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 CNDP2Q96KP4 475 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 TTC25Q96NG3 672 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 IL22Q9GZX6 179 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 EVA1BQ9NVM1 165 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 NCKIPSDQ9NZQ3 722 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 ZNHIT2Q9UHR6 403 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 RIMKLBQ9ULI2 386 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 GPSM3Q9Y4H4 160 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 OAS3Q9Y6K5 1087 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 SLC30A1Q9Y6M5 507 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 NCOR2Q9Y618 2525 aa22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 ASCC3Q8N3C0 2202 aaKnown RBP22.88■■□□□ 1.25
SMARCB1-205ENST00000417137 YY2O15391 372 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms