RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 RNF151Q2KHN1 245 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 FUT11Q495W5 492 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 C3orf38Q5JPI3 329 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 PRAMEF14Q5SWL7 426 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 USP30Q70CQ3 517 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ERICH1Q86X53 443 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 TMEM25Q86YD3 366 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 DHX40Q8IX18 779 aaKnown RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 CMTM4Q8IZR5 234 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 EID2Q8N6I1 236 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ANKRD53Q8N9V6 530 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 CADM4Q8NFZ8 388 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 KCNE4Q8WWG9 221 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 IGSF8Q969P0 613 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ZNF503Q96F45 646 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 SIPA1Q96FS4 1042 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ZNF560Q96MR9 790 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 XPO6Q96QU8 1125 aaKnown RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 MSTO1Q9BUK6 570 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 NUP58Q9BVL2 599 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 NACA2Q9H009 215 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 LDAHQ9H6V9 325 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 DDX43Q9NXZ2 648 aaKnown RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 WSB2Q9NYS7 404 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ZNF212Q9UDV6 495 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 CLCA2Q9UQC9 943 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 NFE2L3Q9Y4A8 694 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 SNX14Q9Y5W7 946 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 ZFC3H1O60293 1989 aaKnown RBP4.72□□□□□ -1.65
PTPRK-210ENST00000415055 LRBAP50851 2863 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 CRYBG3Q68DQ2 2970 aa4.72□□□□□ -1.65
PTPRK-210ENST00000415055 MED13Q9UHV7 2174 aa4.71□□□□□ -1.65
PTPRK-210ENST00000415055 ENO4A6NNW6 628 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 LGALS16A8MUM7 142 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 KCNJ18B7U540 433 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 E9PMD0 336 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 PIRO00625 290 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 CCP110O43303 1012 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 AHSGP02765 367 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 C1SP09871 688 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 OR52Z1P0C646 297 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 CDK4P11802 303 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 IL1R2P27930 398 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 CARSP49589 748 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ACOT2P49753 483 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 GZMKP49863 264 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ITGA8P53708 1063 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 RAC3P60763 192 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 PSMC1P62191 440 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SLC7A9P82251 487 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TFAMQ00059 246 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 APBA1Q02410 837 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 FOXD4Q12950 439 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TAF10Q12962 218 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 NFYCQ13952 458 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TOB2Q14106 344 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TRIM29Q14134 588 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ZSCAN23Q3MJ62 389 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 L1TD1Q5T7N2 865 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 KLHDC7AQ5VTJ3 777 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 RETSATQ6NUM9 610 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 C4orf50Q6ZRC1 276 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TPGS1Q6ZTW0 290 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 DENND5BQ6ZUT9 1274 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 UNC13DQ70J99 1090 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 RSRC2Q7L4I2 434 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TMPRSS6Q8IU80 811 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 BBS7Q8IWZ6 715 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 CD302Q8IX05 232 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 FUKQ8N0W3 1084 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 DAW1Q8N136 415 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 PDCL2Q8N4E4 241 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TMEM161BQ8NDZ6 487 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SLC30A5Q8TAD4 765 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 NOC3LQ8WTT2 800 aaKnown RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 WASF1Q92558 559 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 MAML1Q92585 1016 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 PRCCQ92733 491 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SCAMP4Q969E2 229 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SPSB4Q96A44 273 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ZNF274Q96GC6 653 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SLITRK1Q96PX8 696 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ACBD6Q9BR61 282 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 C1orf43Q9BWL3 253 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 BBS2Q9BXC9 721 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TRIM9Q9C026 710 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 CHST8Q9H2A9 424 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 FAM83DQ9H4H8 585 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 C6orf106Q9H6K1 298 aaPredicted RBP4.71□□□□□ -1.66
PTPRK-210ENST00000415055 TM9SF3Q9HD45 589 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SAYSD1Q9NPB0 183 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 OBP2BQ9NPH6 170 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 WASH6PQ9NQA3 447 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 ITM2CQ9NQX7 267 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 SPHK2Q9NRA0 654 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 RRN3Q9NYV6 651 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 EHD2Q9NZN4 543 aa4.71□□□□□ -1.66
PTPRK-210ENST00000415055 LRWD1Q9UFC0 647 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms