RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CHEK2O96017 543 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CALCAP01258 141 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TMIGD3P0DMS9 266 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 NR2F6P10588 404 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GABRB1P18505 474 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RPL13P26373 211 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 CD27P26842 260 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 STAT6P42226 847 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 HNMTP50135 292 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PMS2P54278 862 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CDH13P55290 713 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GALK2Q01415 458 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RALGDSQ12967 914 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 FGFBP1Q14512 234 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RABEP1Q15276 862 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SHHQ15465 462 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 HYAL4Q2M3T9 481 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TBC1D25Q3MII6 688 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 NHSL2Q5HYW2 709 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TMEM211Q6ICI0 200 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DENND1BQ6P3S1 775 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 C15orf39Q6ZRI6 1047 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 WDR63Q8IWG1 891 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TRIML1Q8N9V2 468 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 XXYLT1Q8NBI6 393 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CPA5Q8WXQ8 436 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 FAM168AQ92567 244 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ZNF653Q96CK0 615 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PPP1R10Q96QC0 940 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 PAAF1Q9BRP4 392 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CCSER1Q9C0I3 900 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TKTL2Q9H0I9 626 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 HRH4Q9H3N8 390 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 COPS7BQ9H9Q2 264 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 PLK2Q9NYY3 685 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 NDUFA13Q9P0J0 144 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SUCLA2Q9P2R7 463 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 SESN1Q9Y6P5 492 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PHLPP2Q6ZVD8 1323 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 LOXHD1Q8IVV2 1947 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CAPN14A8MX76 684 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GCOM1H8Y6P7 765 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 DSCR3O14972 297 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PRPSAP2O60256 369 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 MFAP3LO75121 409 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 KLKB1P03952 638 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SBK2P0C263 348 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PTPN4P29074 926 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 NBL1P41271 181 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PIP4K2AP48426 406 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 NPY4RP50391 375 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RPL7AP62424 266 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 FOXL1Q12952 345 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DYRK1AQ13627 763 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 MAJINQ3KP22 176 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DPCR1Q3MIW9 517 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ANKDD1AQ495B1 522 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 COLEC12Q5KU26 742 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SLFN13Q68D06 897 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PMS2CLQ68D20 193 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ARHGEF18Q6ZSZ5 1173 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ARHGAP12Q8IWW6 846 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ZCCHC9Q8N567 271 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 HJURPQ8NCD3 748 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 PRSS33Q8NF86 280 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TNIP2Q8NFZ5 429 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SLC2A12Q8TD20 617 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 N4BP2L2Q92802 583 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 CCDC120Q96HB5 630 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TOX2Q96NM4 488 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 WRNIP1Q96S55 665 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 FERMT1Q9BQL6 677 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 XYLT2Q9H1B5 865 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 BPIFA1Q9NP55 256 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 DDX4Q9NQI0 724 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.6□□□□□ -1.99
MCF2-204ENST00000414978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.6□□□□□ -1.99
MCF2-204ENST00000414978 ANKFY1Q9P2R3 1169 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 KIF16BQ96L93 1317 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 CGB1A6NKQ9 187 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CLIC1O00299 241 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ABLIM1O14639 778 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 NKX2-8O15522 239 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GHRP10912 638 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 COX7A2P14406 83 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 KLRC2P26717 231 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 PRKAR2BP31323 418 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 SLC5A2P31639 672 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 GABRA5P31644 462 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TMPOP42166 694 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 SUOXP51687 545 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 HDAC4P56524 1084 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 RPS8P62241 208 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 UBE2HP62256 183 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TXNL4AP83876 142 aaKnown RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 GFPT1Q06210 699 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 RESTQ13127 1097 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 ITGADQ13349 1161 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 IL11RAQ14626 422 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms