RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 IVLP07476 585 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 GPR89BP0CG08 455 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 DGKAP23743 735 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 IVDP26440 423 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 BNIP3Q12983 259 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 SEPT6Q14141 434 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 ZNF542PQ5EBM4 170 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 PCID2Q5JVF3 399 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 ANKRD22Q5VYY1 191 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 PIP4P1Q86T03 277 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 HOOK3Q86VS8 718 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 PHYKPLQ8IUZ5 450 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 OR13C4Q8NGS5 318 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 PTCD2Q8WV60 388 aaKnown RBP16.35■□□□□ 0.21
LINC00398-201ENST00000414407 OR1E3Q8WZA6 343 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 RMI1Q9H9A7 625 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 FGF22Q9HCT0 170 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 SMOXQ9NWM0 555 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 SPASTQ9UBP0 616 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 APOBEC3BQ9UH17 382 aaKnown RBP16.35■□□□□ 0.21
LINC00398-201ENST00000414407 TCAF1Q9Y4C2 921 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 MRFAP1Q9Y605 127 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 TMEM131Q92545 1883 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 SCN8AQ9UQD0 1980 aa16.35■□□□□ 0.21
LINC00398-201ENST00000414407 PRSS38A1L453 326 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 NEMP2A6NFY4 417 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 AGAP14A8MT82 685 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 NDC80O14777 642 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TTI1O43156 1089 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 SRP72O76094 671 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TMEM63AO94886 807 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 SLC25A14O95258 325 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 CSRP1P21291 193 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 GRK6P43250 576 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 SESN2P58004 480 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 XIAPP98170 497 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 IL9RQ01113 521 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 ACVR1Q04771 509 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 PTPRCAPQ14761 206 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 CHRNA6Q15825 494 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 ATP13A5Q4VNC0 1218 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TSTD2Q5T7W7 516 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 FAM151BQ6UXP7 276 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 CAND1Q86VP6 1230 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 HID1Q8IV36 788 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 FSTL5Q8N475 847 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 PPHLN1Q8NEY8 458 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 ZNF398Q8TD17 642 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TSACCQ96A04 125 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 PDXPQ96GD0 296 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 CDKN2AIPNLQ96HQ2 116 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 DNAJC1Q96KC8 554 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 MRM3Q9HC36 420 aaKnown RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TRIM39Q9HCM9 518 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 FKBPLQ9UIM3 349 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 TP53BP1Q12888 1972 aaPredicted RBP16.34■□□□□ 0.21
LINC00398-201ENST00000414407 CFAP54Q96N23 3096 aa16.34■□□□□ 0.21
LINC00398-201ENST00000414407 SCAMP1O15126 338 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 AQP9O43315 295 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 VEGFDO43915 354 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 PRAMEF1O95521 474 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 C2orf54Q08AI8 447 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 NFATC2Q13469 925 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 PEX6Q13608 980 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 MORF4L2Q15014 288 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 ELOCQ15369 112 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 GPR33Q49SQ1 333 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 CCDC38Q502W7 563 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 GATAD2AQ86YP4 633 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 NAXDQ8IW45 347 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 SLC25A45Q8N413 288 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 MNS1Q8NEH6 495 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 ZNF548Q8NEK5 533 aaPredicted RBP16.33■□□□□ 0.2
LINC00398-201ENST00000414407 DDHD1Q8NEL9 900 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 SGSM3Q96HU1 749 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 SERPINB12Q96P63 405 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 KIFC1Q9BW19 673 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 CYP4F12Q9HCS2 524 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
LINC00398-201ENST00000414407 TMPRSS11EQ9UL52 423 aa16.33■□□□□ 0.2
LINC00398-201ENST00000414407 MAGEB16A2A368 324 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 TPP1O14773 563 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 SH3BP5O60239 455 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 SDC3O75056 442 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 FUCA1P04066 466 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 CTSEP14091 401 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 ITGALP20701 1170 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 MAGEA3P43357 314 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 TERF1P54274 439 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 TMPRSS15P98073 1019 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 PUM1Q14671 1186 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00398-201ENST00000414407 PRRT3Q5FWE3 981 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 LDLRAP1Q5SW96 308 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 IZUMO3Q5VZ72 239 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 LVRNQ6Q4G3 990 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 RD3Q7Z3Z2 195 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 SNX20Q7Z614 316 aa16.32■□□□□ 0.2
LINC00398-201ENST00000414407 TRIM74Q86UV6 250 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms