RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNF839A8K0R7 811 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 A8MV72 311 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CENPBD1B2RD01 187 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 FAM47E-STBD1D6RA91 191 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 H0YJX3 145 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 AIM2O14862 343 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 BET1O15155 118 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ALOX15BO15296 676 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 HTRA2O43464 458 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 AKR7A2O43488 359 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DENRO43583 198 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NOBOXO60393 691 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PSIP1O75475 530 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SUPT3HO75486 399 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PRDM1O75626 825 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CLPXO76031 633 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PDE5AO76074 875 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RECQL5O94762 991 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 UFL1O94874 794 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PDE8BO95263 885 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SIX3O95343 332 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 F9P00740 461 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TGFAP01135 160 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TFRCP02786 760 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TK1P04183 234 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CYBBP04839 570 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 MMP2P08253 660 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 LINGO3P0C6S8 592 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 UQCRFS1P1P0C7P4 283 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GLI4P10075 376 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GNAT1P11488 350 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 MLNP12872 115 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 FDPSP14324 419 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ATP2A2P16615 1042 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TACR2P21452 398 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 AGXTP21549 392 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CPT2P23786 658 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 APOBEC3AP31941 199 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SHMT1P34896 483 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CTNNB1P35222 781 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RORAP35398 523 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ARL4AP40617 200 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 KIR3DL2P43630 455 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CASP4P49662 377 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RAP1GDS1P52306 607 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 COPB1P53618 953 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CLDN8P56748 225 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SELENOVP59797 346 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 BPIFB4P59827 614 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ACTR2P61160 394 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GLO1Q04760 184 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RASGEF1BQ0VAM2 473 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GALNT2Q10471 571 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 OVGP1Q12889 678 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DGCR6Q14129 220 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PTPRRQ15256 657 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGAP44Q17R89 818 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DPY19L1Q2PZI1 675 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 GTDC1Q4AE62 458 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 BCL7AQ4VC05 210 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PDCD4Q53EL6 469 aaKnown RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PLA1AQ53H76 456 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PAGE2BQ5JRK9 111 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 MARCH8Q5T0T0 291 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PIP5KL1Q5T9C9 394 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ATG16L1Q676U5 607 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DENND2CQ68D51 928 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ARMC6Q6NXE6 501 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PSRC1Q6PGN9 363 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 INO80CQ6PI98 192 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CES3Q6UWW8 571 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ETV3LQ6ZN32 361 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RTL4Q6ZR62 310 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NUDT13Q86X67 352 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC50Q8IVM0 306 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGEF39Q8N4T4 335 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 FNDC5Q8NAU1 212 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NEK11Q8NG66 645 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 OR5T1Q8NG75 326 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CD300LFQ8TDQ1 290 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SLC22A17Q8WUG5 538 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SLC20A1Q8WUM9 679 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SLAMF9Q96A28 289 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM186Q96B77 213 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 RASD2Q96D21 266 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF479Q96JC4 524 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 MSLNLQ96KJ4 702 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 APOLD1Q96LR9 279 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SAMD8Q96LT4 415 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC17Q96LX7 622 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NSMCE3Q96MG7 304 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 PTPN18Q99952 460 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 SEMA3CQ99985 751 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 NAA11Q9BSU3 229 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TUBB6Q9BUF5 446 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 TPPP3Q9BW30 176 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 FRMD8Q9BZ67 464 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-203ENST00000414174 DERL2Q9GZP9 239 aa3.63□□□□□ -1.83
SF3B1-203ENST00000414174 OR52A5Q9H2C5 316 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms