RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 CES1P23141 567 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 MMP13P45452 471 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 GNG11P61952 73 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 XRCC4Q13426 336 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 TIGD7Q6NT04 549 aaPredicted RBP16.65■□□□□ 0.26
SF1-207ENST00000413951 HEATR4Q86WZ0 1026 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 SLC13A5Q86YT5 568 aaPredicted RBP16.65■□□□□ 0.26
SF1-207ENST00000413951 RAVER1Q8IY67 606 aaKnown RBP16.65■□□□□ 0.26
SF1-207ENST00000413951 ZDHHC1Q8WTX9 485 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 P3H4Q92791 437 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 SGF29Q96ES7 293 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 DTD2Q96FN9 168 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 PCDHGC4Q9Y5F7 938 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 RP1P56715 2156 aa16.65■□□□□ 0.26
SF1-207ENST00000413951 GCN1Q92616 2671 aaKnown RBP16.64■□□□□ 0.26
SF1-207ENST00000413951 TCRBV7S2A1N4TA0A589 114 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 CES2O00748 559 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 HGSO14964 777 aaPredicted RBP16.64■□□□□ 0.25
SF1-207ENST00000413951 CA4P22748 312 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 IFI35P80217 286 aaPredicted RBP16.64■□□□□ 0.25
SF1-207ENST00000413951 CDK3Q00526 305 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 DPTQ07507 201 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 TRA2AQ13595 282 aaKnown RBP eCLIP16.64■□□□□ 0.254e-10■□□□□ 9.6
SF1-207ENST00000413951 CNGA3Q16281 694 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 MANEAQ5SRI9 462 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 PHF19Q5T6S3 580 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 RAET1GQ6H3X3 334 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 CCDC13Q8IYE1 715 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 RASGEF1CQ8N431 466 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 ACTL9Q8TC94 416 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 TRIM44Q96DX7 344 aaPredicted RBP16.64■□□□□ 0.25
SF1-207ENST00000413951 QKIQ96PU8 341 aaKnown RBP eCLIP16.64■□□□□ 0.256e-44■■■■□ 25.8
SF1-207ENST00000413951 ARHGAP9Q9BRR9 750 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 LGR4Q9BXB1 951 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 CDH19Q9H159 772 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 NOD2Q9HC29 1040 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 AMACRQ9UHK6 382 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.25
SF1-207ENST00000413951 SNX12Q9UMY4 172 aa16.64■□□□□ 0.25
SF1-207ENST00000413951 COL27A1Q8IZC6 1860 aaPredicted RBP16.64■□□□□ 0.25
SF1-207ENST00000413951 PMS2P1A4D2B8 440 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 GOLGA6CA6NDK9 693 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 GOLGA6BA6NDN3 693 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 HACD1B0YJ81 288 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 PGLSO95336 258 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 CEACAM5P06731 702 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 IVLP07476 585 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 GOLGA6DP0CG33 693 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 ZNF30P17039 623 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 GM2AP17900 193 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 OTUD4Q01804 1114 aaKnown RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 LY6DQ14210 128 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 NR1D2Q14995 579 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 KIAA1614Q5VZ46 1190 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 PAPD7Q5XG87 772 aaKnown RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 DENND2CQ68D51 928 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 ALG1LQ6GMV1 187 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 ZNF438Q7Z4V0 828 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 NLRP8Q86W28 1048 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 SLITRK4Q8IW52 837 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 CBARPQ8N350 705 aaPredicted RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 TTC13Q8NBP0 860 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 HAUS1Q96CS2 278 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 PBKQ96KB5 322 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 MCCC1Q96RQ3 725 aaPredicted RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 FRMD8Q9BZ67 464 aaPredicted RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 POLR1EQ9GZS1 481 aaKnown RBP16.63■□□□□ 0.25
SF1-207ENST00000413951 GOLGA6AQ9NYA3 693 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 TAAR2Q9P1P5 351 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 SLC17A4Q9Y2C5 497 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
SF1-207ENST00000413951 KALRNO60229 2985 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 FGF1P05230 155 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 HGFP14210 728 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 ALDH4A1P30038 563 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 CXCR5P32302 372 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 ETV3P41162 512 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 GPR1P46091 355 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 GNPDA1P46926 289 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 ETF1P62495 437 aaKnown RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 B4GALNT1Q00973 533 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 LRP8Q14114 963 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 SIX1Q15475 284 aaPredicted RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 PGBD5Q8N414 524 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 CCNYQ8ND76 341 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 SLC35B2Q8TB61 432 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 LRRN4Q8WUT4 740 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 SUFUQ9UMX1 484 aa16.62■□□□□ 0.25
SF1-207ENST00000413951 R3HDM2Q9Y2K5 976 aaKnown RBP16.62■□□□□ 0.25
SF1-207ENST00000413951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.61■□□□□ 0.25
SF1-207ENST00000413951 CASC3O15234 703 aaKnown RBP16.61■□□□□ 0.25
SF1-207ENST00000413951 EFSO43281 561 aa16.61■□□□□ 0.25
SF1-207ENST00000413951 MTSS1O43312 755 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms