RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SLC41A1Q8IVJ1 513 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MFN1Q8IWA4 741 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC117Q8IWD4 279 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FAM71AQ8IYT1 594 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DEFB106AQ8N104 65 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CFAP52Q8N1V2 620 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CARNMT1Q8N4J0 409 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 WDTC1Q8N5D0 677 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ZNF366Q8N895 744 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ATP6V0D2Q8N8Y2 350 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 OR2T3Q8NH03 318 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FIBINQ8TAL6 211 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CEP76Q8TAP6 659 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 WFDC5Q8TCV5 224 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CASKIN2Q8WXE0 1202 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 RAPGEF5Q92565 580 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PRCCQ92733 491 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 MYEOVQ96EZ4 313 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SIPA1Q96FS4 1042 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CHMP6Q96FZ7 201 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CAPZA3Q96KX2 299 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PRICKLE1Q96MT3 831 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 CPXM1Q96SM3 734 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 GPR174Q9BXC1 333 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 LHX5Q9H2C1 402 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 POPDC2Q9HBU9 364 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FAM114A2Q9NRY5 505 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 TMEM74BQ9NUR3 256 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 ASNSD1Q9NWL6 643 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 WSB2Q9NYS7 404 aaPredicted RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 USP36Q9P275 1121 aaKnown RBP5.38□□□□□ -1.55
LINC00342-201ENST00000412393 FAM153AQ9UHL3 310 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PILRBQ9UKJ0 227 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 NENFQ9UMX5 172 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PLA2G4CQ9UP65 541 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 C15orf41Q9Y2V0 281 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 DAAM1Q9Y4D1 1078 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 PLXNA2O75051 1894 aa5.38□□□□□ -1.55
LINC00342-201ENST00000412393 SYNJ2BP-COX16A0A087WUM0 186 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 GOLGA6L10A0A0M3HER8 536 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 MEI4A8MW99 385 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 KCNU1A8MYU2 1149 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 E7EVH7 732 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 F5H5T6 163 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 H0Y626 953 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CDX4O14627 284 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 AHCYL1O43865 530 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 GRAP2O75791 330 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 LUC7L3O95232 432 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 KCNK5O95279 499 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 MOCS3O95396 460 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 IGLV3-25P01717 112 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ASLP04424 464 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ERBB2P04626 1255 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SERPINF2P08697 491 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 DLDP09622 509 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC2A3P11169 496 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 GNSP15586 552 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ENGP17813 658 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 OXTRP30559 389 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 HOXD12P35452 270 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CSKP41240 450 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 PRKCIP41743 596 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 TPMTP51580 245 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 COPAP53621 1224 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ATXN3P54252 364 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ST8SIA6P61647 398 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 RPL11P62913 178 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC7A5Q01650 507 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 GUCY2DQ02846 1103 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 GFPT1Q06210 699 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC15Q0P6D6 951 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 EIF4EBP2Q13542 120 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CDH18Q13634 790 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 TAF5Q15542 800 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 UAP1Q16222 522 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC18A3Q16572 532 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 UAP1L1Q3KQV9 507 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 PTPN20Q4JDL3 420 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 WDR45BQ5MNZ6 344 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SYCP2LQ5T4T6 812 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 RNF187Q5TA31 235 aaPredicted RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 AP1ARQ63HQ0 302 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 RAP1GAP2Q684P5 730 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 DPY19L2P1Q6NXN4 242 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 FAM183BPQ6ZVS7 135 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 SLC26A9Q7LBE3 791 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 RABEPKQ7Z6M1 372 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CHSY1Q86X52 802 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 C19orf47Q8N9M1 422 aaKnown RBP5.37□□□□□ -1.55
LINC00342-201ENST00000412393 CCDC197Q8NCU1 140 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 TTC17Q96AE7 1141 aa5.37□□□□□ -1.55
LINC00342-201ENST00000412393 ZG16BQ96DA0 208 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms