RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 GLYATL1Q969I3 302 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 LRRC61Q9BV99 259 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 SPATA16Q9BXB7 569 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 AP1M1Q9BXS5 423 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 IL21RQ9HBE5 538 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 MRM3Q9HC36 420 aaKnown RBP8.16□□□□□ -1.1
RPE-204ENST00000411934 XAB2Q9HCS7 855 aaKnown RBP8.16□□□□□ -1.1
RPE-204ENST00000411934 FGF22Q9HCT0 170 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 NLE1Q9NVX2 485 aaPredicted RBP8.16□□□□□ -1.1
RPE-204ENST00000411934 CD84Q9UIB8 345 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 PCDHGA1Q9Y5H4 931 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 KNL1Q8NG31 2342 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 FADS2P1A8MWK0 482 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 F5H423 210 aaPredicted RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 QSOX1O00391 747 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 AURKAO14965 403 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 CHUKO15111 745 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 ZNF185O15231 689 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 FANCGO15287 622 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 TNFSF14O43557 240 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 LDB2O43679 373 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 KCNJ13O60928 360 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 DKK1O94907 266 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 KCNK5O95279 499 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 PRAMEF1O95521 474 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 CEACAM5P06731 702 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 CTSEP14091 401 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 ITGALP20701 1170 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 ADRA1DP25100 572 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 NPY2RP49146 381 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 DUSP3P51452 185 aaPredicted RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 NOVA1P51513 510 aaKnown RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 ACVR1Q04771 509 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 CKAP4Q07065 602 aaKnown RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 ILF3Q12906 894 aaKnown RBP eCLIP8.15□□□□□ -1.14e-7■■■■□ 24.8
RPE-204ENST00000411934 GPS1Q13098 491 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 NFATC2Q13469 925 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 PTPRRQ15256 657 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 SKIDA1Q1XH10 827 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 PRRT3Q5FWE3 981 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 C6orf132Q5T0Z8 1188 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 FAXCQ5TGI0 409 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 LRRC8BQ6P9F7 803 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 SYT10Q6XYQ8 523 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 DGLUCYQ7Z3D6 616 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 SNX20Q7Z614 316 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 PELI3Q8N2H9 469 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 AVL9Q8NBF6 648 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 OR6C4Q8NGE1 309 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 OR2I1PQ8NGU4 316 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 SCG3Q8WXD2 468 aaKnown RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 OR1E3Q8WZA6 343 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 PDXPQ96GD0 296 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 ZNF514Q96K75 400 aaPredicted RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 SMIM14Q96QK8 99 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 OR2M4Q96R27 311 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 LGR4Q9BXB1 951 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 GSDMCQ9BYG8 508 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 TRIM39Q9HCM9 518 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 IL26Q9NPH9 171 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 BFARQ9NZS9 450 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 FTSJ1Q9UET6 329 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 CNOT6Q9ULM6 557 aaKnown RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 ARL5AQ9Y689 179 aa8.15□□□□□ -1.1
RPE-204ENST00000411934 DNMT3AQ9Y6K1 912 aaPredicted RBP8.15□□□□□ -1.1
RPE-204ENST00000411934 WDR87Q6ZQQ6 2873 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 TRBV5-4A0A0C4DH59 114 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 TMEM202A6NGA9 273 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 CFAP99D6REC4 459 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 GAPDHSO14556 408 aaPredicted RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 DNALI1O14645 258 aaPredicted RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 SH3BP5O60239 455 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 NUAK1O60285 661 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 DNAJC6O75061 913 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 USP12O75317 370 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 SRP72O76094 671 aaKnown RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 SLC25A14O95258 325 aaPredicted RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 SLC4A1P02730 911 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 GP1BAP07359 652 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 ANXA6P08133 673 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 GSTM1P09488 218 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 ZSCAN5DPP0CG00 497 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 SLC2A4P14672 509 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 ETS1P14921 441 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 ACP1P24666 158 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 PPARGP37231 505 aaPredicted RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 MAGEA3P43357 314 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 RPIAP49247 311 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 XIAPP98170 497 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 FOXK2Q01167 660 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 DR1Q01658 176 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 GSTM4Q03013 218 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 OLIG2Q13516 323 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 PPP1R7Q15435 360 aa8.14□□□□□ -1.11
RPE-204ENST00000411934 TRIP6Q15654 476 aaKnown RBP8.14□□□□□ -1.11
RPE-204ENST00000411934 WHAMMP3Q1A5X7 153 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms