RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 MYCLP1P12525 358 aaPredicted RBP20.48■□□□□ 0.87
C4orf48-202ENST00000409860 HTR1BP28222 390 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 MPLP40238 635 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 THOP1P52888 689 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 KIAA1024LP59773 190 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 CACNG1Q06432 222 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 NFATC2Q13469 925 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 CRYMQ14894 314 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 FASTKD3Q14CZ7 662 aaKnown RBP20.48■□□□□ 0.87
C4orf48-202ENST00000409860 ERCC6LQ2NKX8 1250 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 GPR33Q49SQ1 333 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 ATP13A5Q4VNC0 1218 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 ZRANB3Q5FWF4 1079 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 KDM7AQ6ZMT4 941 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 DCP2Q8IU60 420 aaKnown RBP20.48■□□□□ 0.87
C4orf48-202ENST00000409860 PHYKPLQ8IUZ5 450 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 OR13H1Q8NG92 308 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 GLYATL1Q969I3 302 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 HIC2Q96JB3 615 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 FCRL3Q96P31 734 aaPredicted RBP20.48■□□□□ 0.87
C4orf48-202ENST00000409860 VPS35Q96QK1 796 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 TEX101Q9BY14 249 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 ARRDC1-AS1Q9H2J1 176 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 SMOXQ9NWM0 555 aa20.48■□□□□ 0.87
C4orf48-202ENST00000409860 TLR4O00206 839 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 INPP4BO15327 924 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A9O60656 530 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 VAPBO95292 243 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 LMNAP02545 664 aaKnown RBP20.47■□□□□ 0.87
C4orf48-202ENST00000409860 WNT1P04628 370 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 CFIP05156 583 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A6P19224 532 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A1P22309 533 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A4P22310 534 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 KELP23276 732 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 MCM3P25205 808 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A3P35503 534 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A5P35504 534 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 MAGEA4P43358 317 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 CSNK1EP49674 416 aaKnown RBP20.47■□□□□ 0.87
C4orf48-202ENST00000409860 PTK2BQ14289 1009 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 NFATC4Q14934 902 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 LONRF1Q17RB8 773 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 STEAP4Q687X5 459 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 LAYNQ6UX15 382 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UNC5AQ6ZN44 842 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 PALM2Q8IXS6 379 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 OR4L1Q8NH43 312 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 GDAP1Q8TB36 358 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 BTN2A2Q8WVV5 523 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 FUBP1Q96AE4 644 aaKnown RBP20.47■□□□□ 0.87
C4orf48-202ENST00000409860 SGSM3Q96HU1 749 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A7Q9HAW7 530 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A10Q9HAW8 530 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 UGT1A8Q9HAW9 530 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 FAM169AQ9Y6X4 670 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 LRRK1Q38SD2 2015 aa20.47■□□□□ 0.87
C4orf48-202ENST00000409860 GON4LQ3T8J9 2241 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 SDK1Q7Z5N4 2213 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 ZCWPW2A0A1B0GU75 182 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 OR51F1A6NGY5 319 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 SLC25A14O95258 325 aaPredicted RBP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 FOXN2P32314 431 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 PDE1CQ14123 709 aaPredicted RBP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 FASTKD1Q53R41 847 aaKnown RBP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 TAS2R42Q7RTR8 314 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 OTUD6BQ8N6M0 293 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 TTC1Q99614 292 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 FAM96AQ9H5X1 160 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 GPR27Q9NS67 375 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 CATSPERZQ9NTU4 200 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 C20orf96Q9NUD7 363 aaPredicted RBP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 CNOT6Q9ULM6 557 aaKnown RBP20.46■□□□□ 0.87
C4orf48-202ENST00000409860 MYLKQ15746 1914 aa20.46■□□□□ 0.87
C4orf48-202ENST00000409860 SCN8AQ9UQD0 1980 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 A0A1B0GVT2 93 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 GPR39O43194 453 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 ARNTP27540 789 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 ARCN1P48444 511 aaKnown RBP20.45■□□□□ 0.86
C4orf48-202ENST00000409860 NXPH1P58417 271 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 THOC5Q13769 683 aaKnown RBP20.45■□□□□ 0.86
C4orf48-202ENST00000409860 SLMAPQ14BN4 828 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 TRIM61Q5EBN2 209 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 AARS2Q5JTZ9 985 aaKnown RBP20.45■□□□□ 0.86
C4orf48-202ENST00000409860 LDLRAP1Q5SW96 308 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 MACC1Q6ZN28 852 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 TRIM74Q86UV6 250 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 RELL1Q8IUW5 271 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 NXPE1Q8N323 547 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 GABPB2Q8TAK5 448 aaPredicted RBP20.45■□□□□ 0.86
C4orf48-202ENST00000409860 GSDMBQ8TAX9 411 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 COX14Q96I36 57 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 C9orf72Q96LT7 481 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 WDR92Q96MX6 357 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 LGR4Q9BXB1 951 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 NCDNQ9UBB6 729 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 PLXNA2O75051 1894 aa20.45■□□□□ 0.86
C4orf48-202ENST00000409860 TRBV5-4A0A0C4DH59 114 aa20.44■□□□□ 0.86
C4orf48-202ENST00000409860 AGAP14A8MT82 685 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms