RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SPINT1O43278 529 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ESR1P03372 595 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 LTA4HP09960 611 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 CPA3P15088 417 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF37AP17032 561 aaPredicted RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ITGB7P26010 798 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ACRV1P26436 265 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 PMLP29590 882 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 CA5AP35218 305 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 MMP12P39900 470 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 SPINT3P49223 89 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 KPNA2P52292 529 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 PRKAA2P54646 552 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 BST1Q10588 318 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ELAVL3Q14576 367 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 FNDC3BQ53EP0 1204 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ZRANB3Q5FWF4 1079 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ATG16L1Q676U5 607 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 PARS2Q7L3T8 475 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 SPATA21Q7Z572 469 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 CACNA2D3Q8IZS8 1091 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 FSTL5Q8N475 847 aaPredicted RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 GPR26Q8NDV2 337 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 TTC8Q8TAM2 541 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 HEXDCQ8WVB3 486 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 UCMAQ8WVF2 138 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 NXNL1Q96CM4 212 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 ELAC2Q9BQ52 826 aaKnown RBP5.49□□□□□ -1.53
EPHA4-202ENST00000409854 TSSK1BQ9BXA7 367 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 GPAMQ9HCL2 828 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 OXSMQ9NWU1 459 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 PCDHB1Q9Y5F3 818 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 SLC30A1Q9Y6M5 507 aa5.49□□□□□ -1.53
EPHA4-202ENST00000409854 IGLV3-16A0A075B6K0 115 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 RGSL1A5PLK6 1076 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C16orf96A6NNT2 1141 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PSMD11O00231 422 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 NPC1O15118 1278 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 H2AFYO75367 372 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 NDUFS3O75489 264 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SERPINE1P05121 402 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PKMP14618 531 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ITGALP20701 1170 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SAT1P21673 171 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SP100P23497 879 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 GRK2P25098 689 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 NFKBIAP25963 317 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 IL12RB1P42701 662 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PFKPQ01813 784 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ACAP2Q15057 778 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 RBBP5Q15291 538 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CHI3L2Q15782 390 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 FAM151BQ6UXP7 276 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 FAM47EQ6ZV65 393 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 TBC1D1Q86TI0 1168 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PIM3Q86V86 326 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C10orf107Q8IVU9 208 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF366Q8N895 744 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CCDC197Q8NCU1 140 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ZNF398Q8TD17 642 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ANKRD49Q8WVL7 239 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 OR8D1Q8WZ84 308 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 KCNJ9Q92806 393 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 TSNARE1Q96NA8 513 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 MRPL57Q9BQC6 102 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 MRPL46Q9H2W6 279 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 FAM96AQ9H5X1 160 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PCDH12Q9NPG4 1184 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SMOXQ9NWM0 555 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SARDHQ9UL12 918 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 RUVBL2Q9Y230 463 aaKnown RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 GRXCR2A6NFK2 248 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 H0Y858 1186 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 TK2O00142 265 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 GPR39O43194 453 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 OR1I1O60431 355 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 APODP05090 189 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C7P10643 843 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CD1DP15813 335 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 GM2AP17900 193 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 TNFRSF4P43489 277 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 E2F5Q15329 346 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CHRNA6Q15825 494 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 FAM83EQ2M2I3 478 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 AGAP9Q5VTM2 703 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 SERPINA9Q86WD7 417 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 NXPE1Q8N323 547 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CCDC63Q8NA47 563 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C10orf82Q8WW14 230 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C17orf50Q8WW18 174 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 EZH1Q92800 747 aaPredicted RBP5.48□□□□□ -1.53
EPHA4-202ENST00000409854 PBXIP1Q96AQ6 731 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 ARRDC3Q96B67 414 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 C20orf27Q9GZN8 174 aa5.48□□□□□ -1.53
EPHA4-202ENST00000409854 CDH19Q9H159 772 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms