RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PRKAG3Q9UGI9 489 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 PCDHGB3Q9Y5G1 929 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 GPR32O75388 356 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 GNSP15586 552 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 DNAJB1P25685 340 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 CMPK1P30085 196 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 RTL10Q7L3V2 364 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 FITM2Q8N6M3 262 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 SMOQ99835 787 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 TTLL2Q9BWV7 592 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 LIMD1Q9UGP4 676 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 TRAF6Q9Y4K3 522 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 PCDHGC4Q9Y5F7 938 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 INPPL1O15357 1258 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 CNOT3O75175 753 aaKnown RBP16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 TM7SF2O76062 418 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 GSTM1P09488 218 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 ABCG1P45844 678 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 SLC25A3Q00325 362 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 SYPL2Q5VXT5 272 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 CRTC3Q6UUV7 619 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 LINGO4Q6UY18 593 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 SAMD14Q8IZD0 417 aaPredicted RBP16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 EFCAB3Q8N7B9 438 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 OR2AP1Q8NGE2 309 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 POF1BQ8WVV4 589 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 FIG4Q92562 907 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 ITCHQ96J02 903 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 TMEM79Q9BSE2 394 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 CERS4Q9HA82 394 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 VPS4AQ9UN37 437 aa16.71■□□□□ 0.27
PCDHA13-202ENST00000409494 GSAPA4D1B5 854 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 PTPN5P54829 565 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 GDPD4Q6W3E5 623 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 ITFG1Q8TB96 612 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 SHISA4Q96DD7 197 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 PTCD3Q96EY7 689 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 NECTIN4Q96NY8 510 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC17A7Q9P2U7 560 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 EPOP01588 193 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 ABCB1P08183 1280 aaPredicted RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 C1DQ13901 141 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 IMP3Q9NV31 184 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 SAC3D1A6NKF1 404 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 OR10H2O60403 315 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 MS4A4AQ96JQ5 239 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 ZFRQ96KR1 1074 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 APOL4Q9BPW4 351 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 GNEQ9Y223 722 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 ZNF780BQ9Y6R6 833 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 MYH1P12882 1939 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 CD48P09326 243 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 CSKP41240 450 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 DAB2P98082 770 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 INAVAQ3KP66 663 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 CLNKQ7Z7G1 428 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 ABCG4Q9H172 646 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 SEMA3GQ9NS98 782 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 PRPF19Q9UMS4 504 aaKnown RBP16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 LZTS1Q9Y250 596 aa16.7■□□□□ 0.26
PCDHA13-202ENST00000409494 WNT9AO14904 365 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 PI15O43692 258 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 PEX11AO75192 247 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 GNPDA1P46926 289 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 TRAF2Q12933 501 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 FAM13CQ8NE31 585 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 LRIG1Q96JA1 1093 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SFXN1Q9H9B4 322 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 MCM8Q9UJA3 840 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 AJAP1Q9UKB5 411 aaPredicted RBP16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 FCF1Q9Y324 198 aaKnown RBP16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 HOXD13P35453 343 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 FAM124AQ86V42 546 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SERPINA9Q86WD7 417 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC22A18Q96BI1 424 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 BORCS6Q96GS4 357 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 HERC2P3Q9BVR0 1158 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 TNKS2Q9H2K2 1166 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 NCF4Q15080 339 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC1A5Q15758 541 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 FNBP1LQ5T0N5 605 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 TOX2Q96NM4 488 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SLC2A11Q9BYW1 496 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 ZDHHC18Q9NUE0 388 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 ANAPC2Q9UJX6 822 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 FANCGO15287 622 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 SERPINB7O75635 380 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 IFNA16P05015 189 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 GDI1P31150 447 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 PIGWQ7Z7B1 504 aa16.69■□□□□ 0.26
PCDHA13-202ENST00000409494 MICU2Q8IYU8 434 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms