RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MPP5Q8N3R9 675 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 STON2Q8WXE9 905 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 C9JVG2 144 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 USP17L7P0C7H9 530 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 INSRRP14616 1297 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 GLDCP23378 1020 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 PSMD4P55036 377 aaKnown RBP17.59■□□□□ 0.41
SMPD4-202ENST00000409031 CAMK2GQ13555 558 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-202ENST00000409031 RFTN1Q14699 578 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-202ENST00000409031 UGCGQ16739 394 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 CHSY3Q70JA7 882 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 HEXDCQ8WVB3 486 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 ABCB9Q9NP78 766 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 ANGPT4Q9Y264 503 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 PGRMC2O15173 223 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 B4GALT4O60513 344 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 CST3P01034 146 aaPredicted RBP17.59■□□□□ 0.41
SMPD4-202ENST00000409031 CYP11A1P05108 521 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 FABP3P05413 133 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 OAZ1P54368 228 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 REPS2Q8NFH8 660 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 IRGQQ8WZA9 623 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 ZUFSPQ96AP4 578 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 SLITRK2Q9H156 845 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 NEK6Q9HC98 313 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 FAM172BPA6NC97 362 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 NKRFO15226 690 aaKnown RBP eCLIP17.59■□□□□ 0.418e-7■■□□□ 14.5
SMPD4-202ENST00000409031 THP07101 528 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 RCVRNP35243 200 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 PTPN9P43378 593 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 GNPDA1P46926 289 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 FOXM1Q08050 763 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 INTS6LQ5JSJ4 861 aaKnown RBP17.59■□□□□ 0.41
SMPD4-202ENST00000409031 BORAQ6PGQ7 559 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 GLB1LQ6UWU2 654 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 ZNF567Q8N184 647 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 GBA3Q9H227 469 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 EXD2Q9NVH0 621 aa17.59■□□□□ 0.41
SMPD4-202ENST00000409031 OR6C70A6NIJ9 312 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 C2CD4BA6NLJ0 364 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 MPZL2O60487 215 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 IRF8Q02556 426 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 PABPC1LQ4VXU2 614 aaKnown RBP17.58■□□□□ 0.41
SMPD4-202ENST00000409031 PPP1R26Q5T8A7 1209 aaPredicted RBP17.58■□□□□ 0.41
SMPD4-202ENST00000409031 DDI2Q5TDH0 399 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 LRRC58Q96CX6 371 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 REPS1Q96D71 796 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 MTFMTQ96DP5 389 aaKnown RBP17.58■□□□□ 0.41
SMPD4-202ENST00000409031 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 TIMM22Q9Y584 194 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 NFASCO94856 1347 aa17.58■□□□□ 0.41
SMPD4-202ENST00000409031 FABP12A6NFH5 140 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 NOBOXO60393 691 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 ADRA1BP35368 520 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 CDH18Q13634 790 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 AZIN2Q96A70 460 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 MKS1Q9NXB0 559 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 COMMD9Q9P000 198 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 ZNF701M0R085 212 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 PIP5K1BO14986 540 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 UROSP10746 265 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 PSMA3P25788 255 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 TAS2R39P59534 338 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 HSF2Q03933 536 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 CLCQ05315 142 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 KLF1Q13351 362 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 TIGD6Q17RP2 521 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 SPATS1Q496A3 300 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 FAM92BQ6ZTR7 304 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 C12orf29Q8N999 325 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 TEFMQ96QE5 360 aaKnown RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 YDJCA8MPS7 323 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 CBX4O00257 560 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 BUD23O43709 281 aaKnown RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 CILPO75339 1184 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 MTHFD1P11586 935 aaKnown RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 MYL9P24844 172 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 ALDH3A2P51648 485 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 NRG1Q02297 640 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 NFE2Q16621 373 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-202ENST00000409031 HKDC1Q2TB90 917 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 GPR158Q5T848 1215 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 FAM91A1Q658Y4 838 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 BHLHB9Q6PI77 547 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 SLC45A3Q96JT2 553 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 ZFP42Q96MM3 310 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 OR2B2Q9GZK3 357 aa17.58■□□□□ 0.4
SMPD4-202ENST00000409031 NDUFB5O43674 189 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 MAFO75444 373 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 RNASEH2AO75792 299 aaKnown RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 PTPN1P18031 435 aaKnown RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 PCLAFQ15004 111 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 LIN54Q6MZP7 749 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 AURKBQ96GD4 344 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 FBXL20Q96IG2 436 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 HAPLN3Q96S86 360 aa17.57■□□□□ 0.4
SMPD4-202ENST00000409031 KCTD15Q96SI1 283 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-202ENST00000409031 NUSAP1Q9BXS6 441 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms