RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 ASB8Q9H765 288 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 SFXN1Q9H9B4 322 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 TAGLN3Q9UI15 199 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 SCN8AQ9UQD0 1980 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GLYATL1P3A0A0U1RQE8 302 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 A8MX80 341 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 PRR5-ARHGAP8B1AHC4 643 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 WASH3PC4AMC7 463 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 H3BMM5 538 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GAPDHSO14556 408 aaPredicted RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 PRMT5O14744 637 aaPredicted RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 TRIM24O15164 1050 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GPR39O43194 453 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GRID2O43424 1007 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 CYP17A1P05093 508 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ADH5P11766 374 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ZNF7P17097 686 aaPredicted RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 BPIP17213 487 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 CHRM3P20309 590 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 PTPN5P54829 565 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ARHGAP8P85298 464 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 OR4D1Q15615 310 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 LYPLAL1Q5VWZ2 237 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 METTL21CQ5VZV1 264 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 CRTC1Q6UUV9 634 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 RAB44Q7Z6P3 723 aaPredicted RBP18.84■□□□□ 0.61
USP39-202ENST00000409025 SERPINA9Q86WD7 417 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 PARP9Q8IXQ6 854 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 CHST14Q8NCH0 376 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GRIN3AQ8TCU5 1115 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 STON2Q8WXE9 905 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 EXT2Q93063 718 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ASIC4Q96FT7 647 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 LMAN2LQ9H0V9 348 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 IL26Q9NPH9 171 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 TCF7L2Q9NQB0 619 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 GTSE1Q9NYZ3 720 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 FBXO10Q9UK96 956 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 SLC8A2Q9UPR5 921 aa18.84■□□□□ 0.61
USP39-202ENST00000409025 ZNF106Q9H2Y7 1883 aaKnown RBP18.83■□□□□ 0.61
USP39-202ENST00000409025 PAPLNO95428 1278 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 ADH1CP00326 375 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 HNRNPLP14866 589 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP39-202ENST00000409025 AOC1P19801 751 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 NCF2P19878 526 aaPredicted RBP18.83■□□□□ 0.6
USP39-202ENST00000409025 PBX2P40425 430 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 DGKGP49619 791 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 GALNT1Q10472 559 aaPredicted RBP18.83■□□□□ 0.6
USP39-202ENST00000409025 NFATC2Q13469 925 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 GEN1Q17RS7 908 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 SH2D4BQ5SQS7 431 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 FRMD7Q6ZUT3 714 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 TSPAN33Q86UF1 283 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 LONP2Q86WA8 852 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 AFAP1L2Q8N4X5 818 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 SIDT2Q8NBJ9 832 aaKnown RBP18.83■□□□□ 0.6
USP39-202ENST00000409025 OR2A12Q8NGT7 310 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 MCCC1Q96RQ3 725 aaPredicted RBP18.83■□□□□ 0.6
USP39-202ENST00000409025 ATOH8Q96SQ7 321 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 TRMOQ9BU70 441 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP39-202ENST00000409025 GALPQ9UBC7 116 aa18.83■□□□□ 0.6
USP39-202ENST00000409025 GYG2O15488 501 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 KERAO60938 352 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 RPS3P23396 243 aaKnown RBP eCLIP18.82■□□□□ 0.63e-13■■■■□ 26.3
USP39-202ENST00000409025 SP100P23497 879 aaPredicted RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 VIPR2P41587 438 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 MAGEA10P43363 369 aaPredicted RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 IL2P60568 153 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 POLR2LP62875 67 aaKnown RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 HERVK_113P63132 956 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 EML3Q32P44 896 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 GPR33Q49SQ1 333 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 ZNF678Q5SXM1 525 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 LRRC66Q68CR7 880 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 ACAD11Q709F0 780 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 RBFAQ8N0V3 343 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 KDM1BQ8NB78 822 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CD200R1Q8TD46 325 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CYB5D2Q8WUJ1 264 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 UTP4Q969X6 686 aaKnown RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 RSPRY1Q96DX4 576 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 FAR2Q96K12 515 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 HEPHQ9BQS7 1158 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 ERVK-6Q9BXR3 956 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 NUF2Q9BZD4 464 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 CLPBQ9H078 707 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 RNF112Q9ULX5 631 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 TRBV5-4A0A0C4DH59 114 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 SPECC1L-ADORA2AF8WAN1 911 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 UBXN8O00124 270 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 HOXC11O43248 304 aaPredicted RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 SUPT7LO94864 414 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 HNRNPH1P31943 449 aaKnown RBP18.82■□□□□ 0.6
USP39-202ENST00000409025 CHRNA6Q15825 494 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 TRIM68Q6AZZ1 485 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 RINLQ6ZS11 566 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 KIRREL3Q8IZU9 778 aa18.82■□□□□ 0.6
USP39-202ENST00000409025 PTGR2Q8N8N7 351 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms