RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PRPSAP1Q14558 356 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PYCR3Q53H96 274 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 DCAF12Q5T6F0 453 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TXNRD3NBQ6F5E7 133 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TMEM71Q6P5X7 295 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 WDR74Q6RFH5 385 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 RCOR2Q8IZ40 523 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TRAM1L1Q8N609 369 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 BEND7Q8N7W2 519 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 DTX3LQ8TDB6 740 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 IMP4Q96G21 291 aaKnown RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 COX14Q96I36 57 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 ZNF514Q96K75 400 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 SPATA16Q9BXB7 569 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 FSD1LQ9BXM9 530 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 TDRD6O60522 2096 aaKnown RBP12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
SNORD88B-201ENST00000408454 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 B4E171 279 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 KCNK1O00180 336 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ANXA9O76027 345 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 PDHA1P08559 390 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 CD48P09326 243 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 F3P13726 295 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 HLA-DPA1P20036 260 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 TSPAN7P41732 249 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 MAGEA1P43355 309 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 LIMK2P53671 638 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 MC1RQ01726 317 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ASTE1Q2TB18 679 aaPredicted RBP12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 TEX44Q53QW1 395 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 HENMT1Q5T8I9 393 aaKnown RBP12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ARHGAP40Q5TG30 622 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ZNF449Q6P9G9 518 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 SARM1Q6SZW1 724 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ZNF605Q86T29 641 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 TSPAN33Q86UF1 283 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 LRRTM4Q86VH4 590 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 ARRDC2Q8TBH0 407 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 CATSPER2Q96P56 530 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 FOXP3Q9BZS1 431 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 UCK1Q9HA47 277 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 KLHL8Q9P2G9 620 aaPredicted RBP12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 FAM153AQ9UHL3 310 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 PNMA8BQ9ULN7 279 aaPredicted RBP12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
SNORD88B-201ENST00000408454 MYLKQ15746 1914 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 GOLGA6L9A6NEM1 432 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 F8W8V4 182 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 INPP4BO15327 924 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 GRID2O43424 1007 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 NUAK1O60285 661 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 CLDN7O95471 211 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 GM2AP17900 193 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 MAPK10P53779 464 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 TAS2R40P59535 323 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 B4GALNT1Q00973 533 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 MPP3Q13368 585 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 XRCC4Q13426 336 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 TCEA2Q15560 299 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 QPCTQ16769 361 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 INSCQ1MX18 579 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 CEACAM20Q6UY09 585 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 MARK2Q7KZI7 788 aaKnown RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 CHST15Q7LFX5 561 aaPredicted RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 SFRP1Q8N474 314 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 IL22RA1Q8N6P7 574 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 PLD5Q8N7P1 536 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 HEXDCQ8WVB3 486 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 SCAMP4Q969E2 229 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 GLYATL1Q969I3 302 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 MED8Q96G25 268 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 C19orf43Q9BQ61 176 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 TIMM29Q9BSF4 260 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 SPATS2LQ9NUQ6 558 aaKnown RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 POT1Q9NUX5 634 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 CD84Q9UIB8 345 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 SSUH2Q9Y2M2 353 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 DOCK9Q9BZ29 2069 aa12.74□□□□□ -0.37
SNORD88B-201ENST00000408454 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms