RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 USP53Q70EK8 1073 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 SLITRK4Q8IW52 837 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 DPH1Q9BZG8 443 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 ZFYVE1Q9HBF4 777 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 GLOD4Q9HC38 313 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 UBP1Q9NZI7 540 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNHIT2Q9UHR6 403 aa19.14■□□□□ 0.65
SMARCB1-204ENST00000407422 EML2O95834 649 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 SLC4A1P02730 911 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 CDK18Q07002 472 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 WASHC5Q12768 1159 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 TFDP2Q14188 446 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 NR1D2Q14995 579 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 GPR155Q7Z3F1 870 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 CCDC170Q8IYT3 715 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 GPR26Q8NDV2 337 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 TEKT5Q96M29 485 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 NUDT22Q9BRQ3 303 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 PISDQ9UG56 409 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 LOXL2Q9Y4K0 774 aa19.13■□□□□ 0.65
SMARCB1-204ENST00000407422 TRBV23OR9-2A0A075B6M9 112 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 A0A0A6YYK5 440 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 RGSL1A5PLK6 1076 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 PMPCBO75439 489 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 ITIH1P19827 911 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 SLC5A2P31639 672 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 CD68P34810 354 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 MLLT3P42568 568 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 MAP9Q49MG5 647 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 TFDP3Q5H9I0 405 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 PHF19Q5T6S3 580 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 BROXQ5VW32 411 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 ALS2CLQ60I27 953 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 KATNAL2Q8IYT4 538 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 TFB1MQ8WVM0 346 aaKnown RBP19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 KRT35Q92764 455 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 HAUS1Q96CS2 278 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 UBL7Q96S82 380 aaPredicted RBP19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 RBSNQ9H1K0 784 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 MAGEE1Q9HCI5 957 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 ARFGAP3Q9NP61 516 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 VPS18Q9P253 973 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF711Q9Y462 761 aa19.12■□□□□ 0.65
SMARCB1-204ENST00000407422 hCG_1818297A0A087WSY0 165 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZRANB2O95218 330 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CPNE6O95741 557 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CD1CP29017 333 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF75DP51815 510 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 TMPRSS3P57727 454 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 BIRC2Q13490 618 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 PEX6Q13608 980 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 LRP8Q14114 963 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SPA17Q15506 151 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF648Q5T619 568 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 NKAIN2Q5VXU1 208 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF574Q6ZN55 896 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 BZW1Q7L1Q6 419 aaKnown RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CHST15Q7LFX5 561 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 TMC3Q7Z5M5 1100 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 PIM3Q86V86 326 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZC3H18Q86VM9 953 aaKnown RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 JAMLQ86YT9 394 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SPATA16Q9BXB7 569 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SSUH2Q9Y2M2 353 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SPO11Q9Y5K1 396 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CFAP46Q8IYW2 2715 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 RCCD1A6NED2 376 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SOWAHDA6NJG2 315 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 AURKAO14965 403 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 JMJD7P0C870 316 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ETV5P41161 510 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CLN3Q13286 438 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SLC14A2Q15849 920 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ARHGAP40Q5TG30 622 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 C11orf63Q6NUN7 778 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 ZNF761Q86XN6 746 aaPredicted RBP19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 CCDC50Q8IVM0 306 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 RCOR2Q8IZ40 523 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 SLC37A2Q8TED4 501 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 P3H4Q92791 437 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 KCNK6Q9Y257 313 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 PCDHGA7Q9Y5G6 932 aa19.11■□□□□ 0.65
SMARCB1-204ENST00000407422 NDST3O95803 873 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 CYLC1P35663 651 aaPredicted RBP19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 GPR3P46089 330 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 C16orf72Q14CZ0 275 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 NOMO1Q15155 1222 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 DAAM2Q86T65 1068 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 RCBTB1Q8NDN9 531 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 CCDC97Q96F63 343 aaPredicted RBP19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 HEMGNQ9BXL5 484 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 GPR63Q9BZJ6 419 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 ATXN10Q9UBB4 475 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 TBC1D29Q9UFV1 150 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 DUSP10Q9Y6W6 482 aa19.1■□□□□ 0.65
SMARCB1-204ENST00000407422 NUAK1O60285 661 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 ACP5P13686 325 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 BPIP17213 487 aa19.09■□□□□ 0.65
SMARCB1-204ENST00000407422 NFKB1P19838 968 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms