RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 TTC31Q49AM3 519 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 TMEM52BQ4KMG9 183 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 FAM151BQ6UXP7 276 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 Q6ZVL8 140 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PTAR1Q7Z6K3 402 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 LDB1Q86U70 411 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 SYT12Q8IV01 421 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PELI3Q8N2H9 469 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 GPR26Q8NDV2 337 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 OR13J1Q8NGT2 312 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 OR6P1Q8NGX9 317 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 OR2W6PQ8NHA6 318 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CXorf40AQ8TE69 158 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 FBF1Q8TES7 1133 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 NAT14Q8WUY8 206 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 SCAMP4Q969E2 229 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CAVIN3Q969G5 261 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CDKN2AIPNLQ96HQ2 116 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 MYOCQ99972 504 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 ABCG8Q9H221 673 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 FBRSQ9HAH7 460 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A7Q9HAW7 530 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A10Q9HAW8 530 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 UGT1A8Q9HAW9 530 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 PPANQ9NQ55 473 aaKnown RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 SMYD2Q9NRG4 433 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 IARS2Q9NSE4 1012 aaKnown RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 TREX1Q9NSU2 369 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 C20orf96Q9NUD7 363 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 NLE1Q9NVX2 485 aaPredicted RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 HACD3Q9P035 362 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 IL17CQ9P0M4 197 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 ZFR2Q9UPR6 939 aaKnown RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 CHD6Q8TD26 2715 aa8.32□□□□□ -1.08
GPC3-203ENST00000406757 CNOT1A5YKK6 2376 aaKnown RBP8.32□□□□□ -1.08
GPC3-203ENST00000406757 FREM2Q5SZK8 3169 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SPAARA0A1B0GVQ0 90 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 MAGEB16A2A368 324 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 CCDC151A5D8V7 595 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 PLRG1O43660 514 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 HYAL3O43820 417 aaPredicted RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 FAM155BO75949 473 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 RECQL5O94762 991 aaPredicted RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 USP1O94782 785 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TTC4O95801 387 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 PAK4O96013 591 aaPredicted RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 GOT2P00505 430 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 POLBP06746 335 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TUBBP07437 444 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 C6P13671 934 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ITPKAP23677 461 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ARNTP27540 789 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 MC4RP32245 332 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ABCG1P45844 678 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SPINT3P49223 89 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 STC1P52823 247 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ZBTB16Q05516 673 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ELP6Q0PNE2 266 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 PEX6Q13608 980 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 FGL2Q14314 439 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SEMA3AQ14563 771 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 CHRNA6Q15825 494 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SKIDA1Q1XH10 827 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 MAP7D1Q3KQU3 841 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 MAP9Q49MG5 647 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 HSP90AA5PQ58FG0 334 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ZRANB3Q5FWF4 1079 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SPANXN3Q5MJ09 141 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ZNF648Q5T619 568 aaPredicted RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 LYSMD4Q5XG99 296 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 STEAP4Q687X5 459 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SLC23A3Q6PIS1 610 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TRMT10CQ7L0Y3 403 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 TECPR1Q7Z6L1 1165 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TMEM135Q86UB9 458 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 ABCA7Q8IZY2 2146 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 OTUD6BQ8N6M0 293 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.31□□□□□ -1.08
GPC3-203ENST00000406757 GSDMBQ8TAX9 411 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 STYXQ8WUJ0 223 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 GATA6Q92908 595 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 LRRC39Q96DD0 335 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TOE1Q96GM8 510 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 COQ10AQ96MF6 247 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 RIOK2Q9BVS4 552 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 GTPBP2Q9BX10 602 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 GPR174Q9BXC1 333 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 BTBD1Q9H0C5 482 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 TRABDQ9H4I3 376 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 SLC32A1Q9H598 525 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 C6orf106Q9H6K1 298 aaPredicted RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 MRM3Q9HC36 420 aaKnown RBP8.31□□□□□ -1.08
GPC3-203ENST00000406757 ARFGAP3Q9NP61 516 aa8.31□□□□□ -1.08
GPC3-203ENST00000406757 FZD3Q9NPG1 666 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms