RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 RCAN2Q14206 197 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 GPNMBQ14956 572 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 MAPRE2Q15555 327 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 KLC3Q6P597 504 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PIANPQ8IYJ0 282 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 MFSD2AQ8NA29 543 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 BRSK1Q8TDC3 778 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 EXT2Q93063 718 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 KIAA1191Q96A73 305 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CDKN2AIPNLQ96HQ2 116 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 ACTL8Q9H568 366 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 TFB2MQ9H5Q4 396 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 MID1IP1Q9NPA3 183 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 MARCH5Q9NX47 278 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 RIMKLBQ9ULI2 386 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CDH23Q9H251 3354 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 TMX2-CTNND1H3BSU7 103 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 AZIN1O14977 448 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 H6PDO95479 791 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CDK4P11802 303 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 HRH2P25021 359 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 MAGEA11P43364 429 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CDH15P55291 814 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 ITKQ08881 620 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 ATP6AP1Q15904 470 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 TCTN1Q2MV58 587 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PARP15Q460N3 678 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 SPRED1Q7Z699 444 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PTRH1Q86Y79 214 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 SPPL2CQ8IUH8 684 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CFAP52Q8N1V2 620 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 BLOC1S5Q8TDH9 187 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 TRPC4APQ8TEL6 797 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 LRRC58Q96CX6 371 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 EID2BQ96D98 161 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 MYRFLQ96LU7 910 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 OSBPL11Q9BXB4 747 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 DERL2Q9GZP9 239 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 EGFL7Q9UHF1 273 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PCTPQ9UKL6 214 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 USP34Q70CQ2 3546 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 FAM149AA5PLN7 773 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 BBIP1A8MTZ0 92 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 E2F3O00716 465 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ENPP3O14638 875 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 PSMC3P17980 439 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ATF6P18850 670 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 OGNP20774 298 aaKnown RBP9.79□□□□□ -0.84
MSH2-202ENST00000406134 CES1P23141 567 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 INTS11Q5TA45 600 aaKnown RBP9.79□□□□□ -0.84
MSH2-202ENST00000406134 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 PSAPL1Q6NUJ1 521 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 B3GNT6Q6ZMB0 384 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 MIB1Q86YT6 1006 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 C2orf69Q8N8R5 385 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 RIN3Q8TB24 985 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 GPR62Q9BZJ7 368 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 CATSPERZQ9NTU4 200 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 NDUFA13Q9P0J0 144 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ZNF639Q9UID6 485 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ARPC2O15144 300 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 AKAP10O43572 662 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 OR1I1O60431 355 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 GLP2RO95838 553 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 EPOP01588 193 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 FGF1P05230 155 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 PAX3P23760 479 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 EEF1DP29692 281 aaKnown RBP9.79□□□□□ -0.84
MSH2-202ENST00000406134 PRAMEP78395 509 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 CLCQ05315 142 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 TAF10Q12962 218 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 TSNQ15631 228 aaKnown RBP9.79□□□□□ -0.84
MSH2-202ENST00000406134 SLC36A3Q495N2 470 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 RABL3Q5HYI8 236 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ARMCX6Q7L4S7 300 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 PAPD5Q8NDF8 572 aaKnown RBP9.79□□□□□ -0.84
MSH2-202ENST00000406134 ADAMTS16Q8TE57 1224 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 VOPP1Q96AW1 172 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 ZIC5Q96T25 663 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 IL1RL2Q9HB29 575 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 AIG1Q9NVV5 245 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
MSH2-202ENST00000406134 RAMP2O60895 175 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 HMBSP08397 361 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 MTHFD1P11586 935 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 HLA-DPA1P20036 260 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 DYNC1I2Q13409 638 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 TBPL2Q6SJ96 375 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 RNF19BQ6ZMZ0 732 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 TMEM173Q86WV6 379 aaPredicted RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 CPNE9Q8IYJ1 553 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 WBP2Q969T9 261 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 VPS33AQ96AX1 596 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 ZNF599Q96NL3 588 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 POLR1EQ9GZS1 481 aaKnown RBP9.78□□□□□ -0.84
MSH2-202ENST00000406134 Q9H521 79 aa9.78□□□□□ -0.84
MSH2-202ENST00000406134 LIN28AQ9H9Z2 209 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms