RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 OR8D1Q8WZ84 308 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 FAM129BQ96TA1 746 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 C20orf27Q9GZN8 174 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 P2RY12Q9H244 342 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 SARDHQ9UL12 918 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 HCN2Q9UL51 889 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 PPM1HQ9ULR3 514 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 FAM50BQ9Y247 325 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 COMMD10Q9Y6G5 202 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
CEACAM1-206ENST00000403136 BPTFQ12830 3046 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 AGAP14A8MT82 685 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 ITM2AO43736 263 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 DLX3O60479 287 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 ESR1P03372 595 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 APODP05090 189 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 PYGLP06737 847 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 ZNF7P17097 686 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 SLC1A6P48664 564 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 SPINT3P49223 89 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 PRKAA2P54646 552 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 POM121L1PQ3SYA9 428 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 CTSL3PQ5NE16 218 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 SERPINA13PQ6UXR4 307 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 RFLNAQ6ZTI6 216 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 CRLF3Q8IUI8 442 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 SUSD6Q92537 303 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 PLEKHG4BQ96PX9 1271 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 FBRSL1Q9HCM7 1045 aaKnown RBP13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 NPHS2Q9NP85 383 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 SUN2Q9UH99 717 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 PCDHB1Q9Y5F3 818 aa13.21□□□□□ -0.29
CEACAM1-206ENST00000403136 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GOLGA8CPA6NN73 597 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ANHXE9PGG2 379 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 KPNA3O00505 521 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 VPS26AO75436 327 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ZNF37AP17032 561 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 SKIV2L2P42285 1042 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 IL12RB1P42701 662 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GALK1P51570 392 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 HTR4Q13639 388 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ELAVL3Q14576 367 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 PAQR3Q6TCH7 311 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ISCA2Q86U28 154 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 RBFAQ8N0V3 343 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 KCNJ9Q92806 393 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GPR21Q99679 349 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 PKD2L2Q9NZM6 624 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GALPQ9UBC7 116 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 CRLS1Q9UJA2 301 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 C5orf42Q9H799 3197 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ANTXRLA6NF34 631 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 NIPSNAP2O75323 286 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 H2AFYO75367 372 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 CD1DP15813 335 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 TFEBP19484 476 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 CHRM3P20309 590 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 RPS3P23396 243 aaKnown RBP eCLIP13.2□□□□□ -0.34e-7■■■□□ 16.8
CEACAM1-206ENST00000403136 ATP5F1P24539 256 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ACRV1P26436 265 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ABCE1P61221 599 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 GLIPR1L2Q4G1C9 344 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 LIPMQ5VYY2 423 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 NAPRTQ6XQN6 538 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 DPPA4Q7L190 304 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 PARS2Q7L3T8 475 aaKnown RBP13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 NXPE1Q8N323 547 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 RFWD2Q8NHY2 731 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 C10orf82Q8WW14 230 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 ACOX2Q99424 681 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 CLPBQ9H078 707 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 DCTN4Q9UJW0 460 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 USH1CQ9Y6N9 552 aa13.2□□□□□ -0.3
CEACAM1-206ENST00000403136 REV3LO60673 3130 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 LYPLA1O75608 230 aaPredicted RBP13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 SOX9P48436 509 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 KCNC1P48547 511 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 PFKPQ01813 784 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 RALGDSQ12967 914 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 ATP13A5Q4VNC0 1218 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 EGFLAMQ63HQ2 1017 aa13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 PTRHD1Q6GMV3 140 aaKnown RBP13.19□□□□□ -0.3
CEACAM1-206ENST00000403136 UGT3A1Q6NUS8 523 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms