RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 KDM4CQ9H3R0 1056 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 DKK3Q9UBP4 350 aa25.47■■□□□ 1.67
CPNE1-205ENST00000401607 A0A0G2JND7 137 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 H2AFYO75367 372 aaKnown RBP25.46■■□□□ 1.67
CPNE1-205ENST00000401607 ESR1P03372 595 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 RBP1P09455 135 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 UGT1A6P19224 532 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 TFEBP19484 476 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 CD9P21926 228 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 UGT1A1P22309 533 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 UGT1A4P22310 534 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 GDI1P31150 447 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 UGT1A3P35503 534 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 UGT1A5P35504 534 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 ZNF234Q14588 700 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 HNRNPA1L2Q32P51 320 aaKnown RBP25.46■■□□□ 1.67
CPNE1-205ENST00000401607 ISCA2Q86U28 154 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 FITM2Q8N6M3 262 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 MSLNLQ96KJ4 702 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 GPR21Q99679 349 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 TMEM120AQ9BXJ8 343 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 MARCOQ9UEW3 520 aaPredicted RBP25.46■■□□□ 1.67
CPNE1-205ENST00000401607 C5orf42Q9H799 3197 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 AGAP14A8MT82 685 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 TMEM114B3SHH9 223 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 ZBTB14O43829 449 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 VIPR1P32241 457 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 MTHFRP42898 656 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 PRKAA2P54646 552 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 PAQR3Q6TCH7 311 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 TXNDC5Q8NBS9 432 aaKnown RBP25.46■■□□□ 1.67
CPNE1-205ENST00000401607 HCAR2Q8TDS4 363 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 PTERQ96BW5 349 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 SLC30A3Q99726 388 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 TMEM245Q9H330 911 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 PCDH12Q9NPG4 1184 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 DNAJC16Q9Y2G8 782 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 MTCH2Q9Y6C9 303 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 COMMD10Q9Y6G5 202 aa25.46■■□□□ 1.67
CPNE1-205ENST00000401607 ANTXRLA6NF34 631 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 ARNTLO00327 626 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 PRMT5O14744 637 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-205ENST00000401607 ECI2O75521 394 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 KITP10721 976 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 CYP2A6P11509 494 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-205ENST00000401607 ACRV1P26436 265 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 SPINT3P49223 89 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 ARFIP2P53365 341 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 POM121L1PQ3SYA9 428 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 GPR33Q49SQ1 333 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 C9orf64Q5T6V5 341 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 CHRDL2Q6WN34 429 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 KCNJ9Q92806 393 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 MOCOSQ96EN8 888 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 BOCQ9BWV1 1114 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 SYTL2Q9HCH5 934 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 SARDHQ9UL12 918 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 HCN2Q9UL51 889 aa25.45■■□□□ 1.66
CPNE1-205ENST00000401607 EDDM13A0A1B0GTR0 161 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 TBC1D3BA6NDS4 549 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 NEMP2A6NFY4 417 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 C16orf96A6NNT2 1141 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 H3BMM5 538 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 VPS26AO75436 327 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ZNF30P17039 623 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ATP5F1P24539 256 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 HSF5Q4G112 596 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 GIMAP7Q8NHV1 300 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 PIWIL2Q8TC59 973 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 PLEKHG4BQ96PX9 1271 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ALG9Q9H6U8 611 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ACSS2Q9NR19 701 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 CRLS1Q9UJA2 301 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 RRP15Q9Y3B9 282 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 PCDHB1Q9Y5F3 818 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 GOLGA8CPA6NN73 597 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 HGSO14964 777 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 PYGLP06737 847 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 KCNA5P22460 613 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 RPS3P23396 243 aaKnown RBP eCLIP25.44■■□□□ 1.663e-8■■■□□ 18.5
CPNE1-205ENST00000401607 EIF2DP41214 584 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 KCNC1P48547 511 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 RALGDSQ12967 914 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ARHGEF7Q14155 803 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 LACTB2Q53H82 288 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 LYPLAL1Q5VWZ2 237 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 PARS2Q7L3T8 475 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 RBFAQ8N0V3 343 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 CD200R1Q8TD46 325 aa25.44■■□□□ 1.66
CPNE1-205ENST00000401607 TRMT61BQ9BVS5 477 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 TCF20Q9UGU0 1960 aaKnown RBP25.44■■□□□ 1.66
CPNE1-205ENST00000401607 ZNF7P17097 686 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-205ENST00000401607 PPARGP37231 505 aaPredicted RBP25.43■■□□□ 1.66
CPNE1-205ENST00000401607 NAGLUP54802 743 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 CCDC15Q0P6D6 951 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 TTC7BQ86TV6 843 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 NXPE1Q8N323 547 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 SIDT2Q8NBJ9 832 aaKnown RBP25.43■■□□□ 1.66
CPNE1-205ENST00000401607 PPP4R1Q8TF05 950 aa25.43■■□□□ 1.66
CPNE1-205ENST00000401607 TTC1Q99614 292 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms