RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ILVBLA1L0T0 632 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 H3BN98 237 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TPD52L2O43399 206 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 BUD23O43709 281 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 SRPRAP08240 638 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 PKMP14618 531 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 OGNP20774 298 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 TAS2R41P59536 307 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SLC26A9Q7LBE3 791 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ZNF717Q9BY31 904 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 B3GNT5Q9BYG0 378 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 GRIN2DO15399 1336 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 NPEPPSL1A6NEC2 478 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 WASHC1A8K0Z3 465 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 WASH3PC4AMC7 463 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 XKRYO14609 159 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 FFAR2O15552 330 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CLEC3AO75596 197 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ECDO95905 644 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 ATP5F1P24539 256 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 NSG1P42857 185 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 MORN1Q5T089 497 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 C9orf64Q5T6V5 341 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 WASH2PQ6VEQ5 465 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SNX32Q86XE0 403 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 MR1Q95460 341 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CATSPER2Q96P56 530 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 PRDM8Q9NQV8 689 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SCML1Q9UN30 329 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 FAM234BA2RU67 622 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 KMOO15229 486 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 HEXBP07686 556 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 KCNE1P15382 129 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 HSD17B3P37058 310 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 GRIA4P48058 902 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 KCNJ5P48544 419 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 GPR17Q13304 367 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TMEM145Q8NBT3 493 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CAPSLQ8WWF8 208 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 USP6NLQ92738 828 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 NSMCE2Q96MF7 247 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 EPS8L2Q9H6S3 715 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CROTQ9UKG9 612 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 NUP188Q5SRE5 1749 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 RGPD5Q99666 1765 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 UPK3BL1B0FP48 263 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 UPK3BL2E5RIL1 263 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 LIASO43766 372 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 KRT34O76011 436 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SERPINB3P29508 390 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 GSTM5P46439 218 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CCR8P51685 355 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 NEK2P51955 445 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 HTRA3P83110 453 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TBX2Q13207 712 aaPredicted RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 TEX44Q53QW1 395 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 OR4K2Q8NGD2 314 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 WDR36Q8NI36 951 aaKnown RBP7.91□□□□□ -1.14
USP47-203ENST00000399455 APOL4Q9BPW4 351 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TMEM27Q9HBJ8 222 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ADGRE2Q9UHX3 823 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 SALL3Q9BXA9 1300 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 MYBPHLA2RUH7 354 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 HEPACAM2A8MVW5 462 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 DDX3XO00571 662 aaKnown RBP eCLIP7.91□□□□□ -1.142e-8■■■□□ 16.4
USP47-203ENST00000399455 APBB3O95704 486 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 PIRTP0C851 137 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ETS1P14921 441 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TRIM32Q13049 653 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
USP47-203ENST00000399455 OR7D4Q8NG98 312 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ZCCHC10Q8TBK6 192 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 GDPD5Q8WTR4 605 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 KLHL6Q8WZ60 621 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 RAD51AP1Q96B01 352 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TUBGCP5Q96RT8 1024 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 CLCC1Q96S66 551 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 OR2AG1Q9H205 316 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 RNF121Q9H920 327 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 ZDHHC7Q9NXF8 308 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 TAGLN3Q9UI15 199 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 FZD10Q9ULW2 581 aa7.91□□□□□ -1.14
USP47-203ENST00000399455 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 A8MU76 341 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 MAGEB3O15480 346 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 AKAP8O43823 692 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 CA3P07451 260 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 RPL22P35268 128 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 PRKCIP41743 596 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CCZ1BP86790 482 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 CCZ1P86791 482 aaPredicted RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 DYNC1I2Q13409 638 aaKnown RBP7.9□□□□□ -1.14
USP47-203ENST00000399455 KRT77Q7Z794 578 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 ADAMTS10Q9H324 1103 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 MIOSQ9NXC5 875 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 FBXW2Q9UKT8 454 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 PSMD13Q9UNM6 376 aa7.9□□□□□ -1.14
USP47-203ENST00000399455 NRXN3Q9Y4C0 1643 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms