RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 PRKACGP22612 351 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 IGFBP6P24592 240 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TKTL1P51854 596 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TNFAIP2Q03169 654 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC13A2Q13183 592 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 AQP6Q13520 282 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ATP6AP1Q15904 470 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 UGP2Q16851 508 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 STRADAQ7RTN6 431 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 MIER2Q8N344 545 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 MFSD2AQ8NA29 543 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 OR10Q1Q8NGQ4 319 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 TRUB1Q8WWH5 349 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 LRRC58Q96CX6 371 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PABPC5Q96DU9 382 aaKnown RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 IL12RB2Q99665 862 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 FUNDC2Q9BWH2 189 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 SEMA4BQ9NPR2 832 aaPredicted RBP9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 PRDM8Q9NQV8 689 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 RIC8BQ9NVN3 520 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 KLQ9UEF7 1012 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 NUDT5Q9UKK9 219 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 STAP1Q9ULZ2 295 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 ATP11BQ9Y2G3 1177 aa9.85□□□□□ -0.83
PTCHD4-202ENST00000398738 MAGEB16A2A368 324 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 YJEFN3A6XGL0 299 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ERI2A8K979 691 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 GNGT2O14610 69 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 DCLK1O15075 740 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 BCAS1O75363 584 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 RASAL1O95294 804 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PABPC1P11940 636 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TTKP33981 857 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 INTS11Q5TA45 600 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 AGAP9Q5VTM2 703 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 BROXQ5VW32 411 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 IQSEC1Q6DN90 963 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ANKRD13AQ8IZ07 590 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 CLIP4Q8N3C7 705 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ZCCHC7Q8N3Z6 543 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PPHLN1Q8NEY8 458 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TOP1MTQ969P6 601 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TEX37Q96LM6 180 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PPM1MQ96MI6 270 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 UHRF1Q96T88 793 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ULBP1Q9BZM6 244 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 SMARCAD1Q9H4L7 1026 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MEAF6Q9HAF1 191 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ABCB10Q9NRK6 738 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 OR12D3Q9UGF7 316 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PGAP2Q9UHJ9 254 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 BAG5Q9UL15 447 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 A0A1B0GTL3 188 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 CLDN25C9JDP6 229 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 M0R3G1 203 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TOMM70O94826 608 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ZIC2O95409 532 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 NADKO95544 446 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 GPX3P22352 226 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 IGFBP4P22692 258 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 HLCSP50747 726 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MAXP61244 160 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 UGT3A2Q3SY77 523 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PAGE3Q5JUK9 113 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 CYHR1Q6ZMK1 362 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PTGR2Q8N8N7 351 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PSMA8Q8TAA3 256 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 FBXO30Q8TB52 745 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 WNT8BQ93098 351 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ALPK1Q96QP1 1244 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC30A3Q99726 388 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TBL1YQ9BQ87 522 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 C11orf84Q9BUA3 381 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 EIF2AQ9BY44 585 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 TKTL2Q9H0I9 626 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 INTS7Q9NVH2 962 aaKnown RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 HOXC10Q9NYD6 342 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 HACL1Q9UJ83 578 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 DNAJC15Q9Y5T4 150 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 SOBPA7XYQ1 873 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 XPNPEP2O43895 674 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MOCS2O96007 188 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 S100BP04271 92 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ALDH2P05091 517 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 MBL2P11226 248 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 ARNTP27540 789 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 RFC2P35250 354 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 FOXK2Q01167 660 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 IFITM3Q01628 133 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 YWHAHQ04917 246 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PTPRCAPQ14761 206 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 INAQ16352 499 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 PCID2Q5JVF3 399 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 OTUD1Q5VV17 481 aaPredicted RBP9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 KCTD11Q693B1 232 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM45BPQ6NSW5 357 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 HEATR4Q86WZ0 1026 aa9.84□□□□□ -0.83
PTCHD4-202ENST00000398738 DNERQ8NFT8 737 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms