RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 C11orf63Q6NUN7 778 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 SPOCD1Q6ZMY3 1216 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 B4GALNT4Q76KP1 1039 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
VCX3A-202ENST00000398729 KDELC2Q7Z4H8 507 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 B3GNT8Q7Z7M8 397 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 GALNT13Q8IUC8 556 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 CCDC50Q8IVM0 306 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 RCOR2Q8IZ40 523 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 P3H4Q92791 437 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 TRIB3Q96RU7 358 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 FOXP3Q9BZS1 431 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 FAM83DQ9H4H8 585 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 ZFYVE1Q9HBF4 777 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 EPB41L5Q9HCM4 733 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 SAE1Q9UBE0 346 aaPredicted RBP13.32□□□□□ -0.28
VCX3A-202ENST00000398729 TFR2Q9UP52 801 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 AHCTF1Q8WYP5 2266 aa13.32□□□□□ -0.28
VCX3A-202ENST00000398729 RHPN2P1A8MT19 583 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 KLK10O43240 276 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 MTSS1O43312 755 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 TNFSF15O95150 251 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 ECEL1O95672 775 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 PECAM1P16284 738 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 PTPN3P26045 913 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 CCKBRP32239 447 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 CDK18Q07002 472 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 LRP8Q14114 963 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 PYCR3Q53H96 274 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 FAM182AQ5T1J6 154 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 HENMT1Q5T8I9 393 aaKnown RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 BROXQ5VW32 411 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 LYSMD3Q7Z3D4 306 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 DAAM2Q86T65 1068 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 KATNAL2Q8IYT4 538 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 FBXO39Q8N4B4 442 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 KCNE4Q8WWG9 221 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 TADA1Q96BN2 335 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 CCDC97Q96F63 343 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 PRR11Q96HE9 360 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 RBM41Q96IZ5 413 aaKnown RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 TEKT5Q96M29 485 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 WDR24Q96S15 920 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 DPH1Q9BZG8 443 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 RBSNQ9H1K0 784 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 CLMPQ9H6B4 373 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 GLOD4Q9HC38 313 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 MAGEE1Q9HCI5 957 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 RAD18Q9NS91 495 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 VPS18Q9P253 973 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 ZNHIT2Q9UHR6 403 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 ATXN7L1Q9ULK2 861 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
VCX3A-202ENST00000398729 KIF26BQ2KJY2 2108 aa13.31□□□□□ -0.28
VCX3A-202ENST00000398729 hCG_1818297A0A087WSY0 165 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 SOWAHDA6NJG2 315 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 FADS2P1A8MWK0 482 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 CDRT15L2A8MXV6 281 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 PLD2O14939 933 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 PMPCBO75439 489 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 NDUFA10O95299 355 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ATP1A1P05023 1023 aaKnown RBP13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ITGA2BP08514 1039 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ALDH4A1P30038 563 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 UCNP55089 124 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 B4GALNT1Q00973 533 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 KCNC4Q03721 635 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 MAP9Q49MG5 647 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ZNF438Q7Z4V0 828 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ZC3H18Q86VM9 953 aaKnown RBP13.3□□□□□ -0.28
VCX3A-202ENST00000398729 NAGSQ8N159 534 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 SPATA22Q8NHS9 363 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 SRPK1Q96SB4 655 aaKnown RBP13.3□□□□□ -0.28
VCX3A-202ENST00000398729 GPR63Q9BZJ6 419 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 RMI1Q9H9A7 625 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 CNOT6Q9ULM6 557 aaKnown RBP13.3□□□□□ -0.28
VCX3A-202ENST00000398729 SHOC2Q9UQ13 582 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 ZNF711Q9Y462 761 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 PLEKHM1Q9Y4G2 1056 aa13.3□□□□□ -0.28
VCX3A-202ENST00000398729 UNC13CQ8NB66 2214 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 PMS2P1A4D2B8 440 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 ARHGAP6O43182 974 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 DNAJC6O75061 913 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 CPNE6O95741 557 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 NDST3O95803 873 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 SLC4A1P02730 911 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 PIRTP0C851 137 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 JMJD7P0C870 316 aa13.29□□□□□ -0.28
VCX3A-202ENST00000398729 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms