RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 KREMEN1Q96MU8 473 aa11.75□□□□□ -0.53
TMF1-201ENST00000398559 NXF3Q9H4D5 531 aaKnown RBP11.75□□□□□ -0.53
TMF1-201ENST00000398559 GLOD4Q9HC38 313 aa11.75□□□□□ -0.53
TMF1-201ENST00000398559 SQORQ9Y6N5 450 aa11.75□□□□□ -0.53
TMF1-201ENST00000398559 PCP4L1A6NKN8 68 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ANGPTL1O95841 491 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CDH5P33151 784 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 ADAM17P78536 824 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 TMPRSS11AQ6ZMR5 421 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 PDPRQ8NCN5 879 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 FCRL2Q96LA5 508 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 TRNT1Q96Q11 434 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 AREL1O15033 823 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 PAGE1O75459 146 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 PEX2P28328 305 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 RPS9P46781 194 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 MRPS6P82932 125 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 ENPEPQ07075 957 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 AHSA2Q719I0 299 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 CCDC36Q8IYA8 594 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ELOVL7A1L3X0 281 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 HMGB3O15347 200 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 RPP40O75818 363 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 HOXB6P17509 224 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 LIPEQ05469 1076 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 TSC22D1Q15714 1073 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 SNAPC1Q16533 368 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 XYLT1Q86Y38 959 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CBR4Q8N4T8 237 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 HJURPQ8NCD3 748 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 MKL1Q969V6 931 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 TTLL2Q9BWV7 592 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 MUC13Q9H3R2 512 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 EQTNQ9NQ60 294 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 AASDHPPTQ9NRN7 309 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ASF1AQ9Y294 204 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 RBM7Q9Y580 266 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 TNFRSF11BO00300 401 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CHST10O43529 356 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 GRB14Q14449 540 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ARSHQ5FYA8 562 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 GPR158Q5T848 1215 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 PPP1R14BQ96C90 147 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 DHX33Q9H6R0 707 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 EXD2Q9NVH0 621 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 FAM172BPA6NC97 362 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 SCN2BO60939 215 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 SLC25A14O95258 325 aaPredicted RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 METTL18O95568 372 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CCNE2O96020 404 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ARHGDIBP52566 201 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 NOL9Q5SY16 702 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 OR6K2Q8NGY2 324 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 APOLD1Q96LR9 279 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 COPS8Q99627 209 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 MFHAS1Q9Y4C4 1052 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 GMEB1Q9Y692 573 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 SAGE2PA6NJ88 616 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 IL1BP01584 269 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 S100GP29377 79 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ICAM3P32942 547 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 MNDAP41218 407 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 GNPDA1P46926 289 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 MPPE1Q53F39 396 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CFAP52Q8N1V2 620 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CPT1BQ92523 772 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CSPG4P5Q96PW8 444 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 CORO1BQ9BR76 489 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ACAT2Q9BWD1 397 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 LHX5Q9H2C1 402 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 IKZF4Q9H2S9 585 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 AGO3Q9H9G7 860 aaKnown RBP11.74□□□□□ -0.53
TMF1-201ENST00000398559 SEMA3GQ9NS98 782 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 STOML2Q9UJZ1 356 aa11.74□□□□□ -0.53
TMF1-201ENST00000398559 DNM1LO00429 736 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 MFSD11O43934 449 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 ARFIP1P53367 373 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 AIF1P55008 147 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 SUZ12Q15022 739 aaKnown RBP11.73□□□□□ -0.53
TMF1-201ENST00000398559 PLA2G4EQ3MJ16 856 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 RIOX2Q8IUF8 465 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 RAVER1Q8IY67 606 aaKnown RBP11.73□□□□□ -0.53
TMF1-201ENST00000398559 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 CDCA5Q96FF9 252 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 TCF25Q9BQ70 676 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 ALG2Q9H553 416 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 IFT80Q9P2H3 777 aaPredicted RBP11.73□□□□□ -0.53
TMF1-201ENST00000398559 SEC14L3Q9UDX4 400 aa11.73□□□□□ -0.53
TMF1-201ENST00000398559 ZNF214Q9UL59 606 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms