RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 CD48P09326 243 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 ZNF30P17039 623 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 CCR10P46092 362 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 RAB15P59190 212 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 DSC2Q02487 901 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 SLC25A11Q02978 314 aaKnown RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 NIPAL4Q0D2K0 466 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 LRP8Q14114 963 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 PIGHQ14442 188 aaPredicted RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 ANO6Q4KMQ2 910 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 SNAP47Q5SQN1 464 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 CLEC18BQ6UXF7 455 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 CHST15Q7LFX5 561 aaPredicted RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 GALNT13Q8IUC8 556 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 LRRC49Q8IUZ0 686 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 NLGN4XQ8N0W4 816 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 NLGN4YQ8NFZ3 816 aaPredicted RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 OR10G6Q8NH81 332 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 LRRN4Q8WUT4 740 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 NSMCE1Q8WV22 266 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 NCSTNQ92542 709 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 MAML1Q92585 1016 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 AHCYL2Q96HN2 611 aaKnown RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 ZNHIT2Q9UHR6 403 aa11.93□□□□□ -0.5
TFF3-202ENST00000398431 TMEM184BQ9Y519 407 aaPredicted RBP11.93□□□□□ -0.5
TFF3-202ENST00000398431 FADS2P1A8MWK0 482 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 ASMTLO95671 621 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 DLGAP3O95886 979 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 PYGLP06737 847 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 MYBL1P10243 752 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 MAP4P27816 1152 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 OAS2P29728 719 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 FOXK1P85037 733 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 HHEXQ03014 270 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 ITKQ08881 620 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 KLHL30Q0D2K2 578 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 GALNT2Q10471 571 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 NFATC2Q13469 925 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 UBAP2LQ14157 1087 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 PAFAH1B3Q15102 231 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 ATP13A4Q4VNC1 1196 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 HGSNATQ68CP4 663 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 RAVER1Q8IY67 606 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 NDUFAF2Q8N183 169 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.92□□□□□ -0.5
TFF3-202ENST00000398431 NIPA2Q8N8Q9 360 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 EID2BQ96D98 161 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 NAP1L5Q96NT1 182 aaPredicted RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 LYSMD1Q96S90 227 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 BPIFA3Q9BQP9 254 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 TDRD1Q9BXT4 1180 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 POLR1EQ9GZS1 481 aaKnown RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 RRAGDQ9NQL2 400 aaPredicted RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
TFF3-202ENST00000398431 RBM22Q9NW64 420 aaKnown RBP eCLIP11.92□□□□□ -0.5
TFF3-202ENST00000398431 VPS18Q9P253 973 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 KCNK6Q9Y257 313 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
TFF3-202ENST00000398431 MATN3O15232 486 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 MFSD11O43934 449 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 STK17BO94768 372 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 MMP2P08253 660 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 F8A1P23610 371 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 SERPINB6P35237 376 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 CASRP41180 1078 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 SPINT3P49223 89 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 ABHD18Q0P651 414 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 CDC20Q12834 499 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 HENMT1Q5T8I9 393 aaKnown RBP11.91□□□□□ -0.5
TFF3-202ENST00000398431 ATP1A1-AS1Q5TC04 95 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 NCBP2-AS2Q69YL0 99 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 CEACAM20Q6UY09 585 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 CPNE8Q86YQ8 564 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 FATE1Q969F0 183 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 TRIM11Q96F44 468 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 TBC1D10AQ9BXI6 508 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 GPN2Q9H9Y4 310 aaPredicted RBP11.91□□□□□ -0.5
TFF3-202ENST00000398431 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
TFF3-202ENST00000398431 OGFRQ9NZT2 677 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 RCOR3Q9P2K3 495 aaPredicted RBP11.91□□□□□ -0.5
TFF3-202ENST00000398431 ANKMY1Q9P2S6 941 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 ANAPC2Q9UJX6 822 aa11.91□□□□□ -0.5
TFF3-202ENST00000398431 A0A1B0GTH6 734 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 K7EM74 188 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 NUAK1O60285 661 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CYP1A2P05177 515 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 HLA-DQB2P05538 268 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 PRKAR1AP10644 381 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 ACP5P13686 325 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 F3P13726 295 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms