RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PRPF4O43172 522 aaKnown RBP eCLIP27.32■■□□□ 1.962e-8■□□□□ 11.3
CPNE1-203ENST00000397442 OR1I1O60431 355 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 NDUFS3O75489 264 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 TYK2P29597 1187 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 PGGT1BP53609 377 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 ZBTB16Q05516 673 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 PDE1CQ14123 709 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-203ENST00000397442 GAS6Q14393 721 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 RNF187Q5TA31 235 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-203ENST00000397442 CYP2U1Q7Z449 544 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 UBALD2Q8IYN6 164 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 NRSN1Q8IZ57 195 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 MDM1Q8TC05 714 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 TBRG4Q969Z0 631 aaKnown RBP eCLIP27.32■■□□□ 1.962e-6■■■■■ 26.8
CPNE1-203ENST00000397442 CCDC97Q96F63 343 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-203ENST00000397442 SIPA1Q96FS4 1042 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 ELMO2Q96JJ3 720 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 FOXQ1Q9C009 403 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 ABCG8Q9H221 673 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 SCML1Q9UN30 329 aa27.32■■□□□ 1.96
CPNE1-203ENST00000397442 NDUFV2P19404 249 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 ACRV1P26436 265 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 TAS2R39P59534 338 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 LRRC32Q14392 662 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 USP10Q14694 798 aaKnown RBP27.31■■□□□ 1.96
CPNE1-203ENST00000397442 UBXN2BQ14CS0 331 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 ZKSCAN8Q15776 578 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-203ENST00000397442 PPM1JQ5JR12 505 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 CEP97Q8IW35 865 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 NXPE1Q8N323 547 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 BIRC8Q96P09 236 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 ASB2Q96Q27 587 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 RIOK2Q9BVS4 552 aaKnown RBP27.31■■□□□ 1.96
CPNE1-203ENST00000397442 KCNK9Q9NPC2 374 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 CD320Q9NPF0 282 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 PCMTD2Q9NV79 361 aa27.31■■□□□ 1.96
CPNE1-203ENST00000397442 CORO1CQ9ULV4 474 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-203ENST00000397442 TCRBV21S2A2A0A5A6 115 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 TSPAN6O43657 245 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 RECQL5O94762 991 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-203ENST00000397442 POU4F1Q01851 419 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 CCDC15Q0P6D6 951 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 ILF2Q12905 390 aaKnown RBP27.3■■□□□ 1.96
CPNE1-203ENST00000397442 HECTD2Q5U5R9 776 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 ARFGAP2Q8N6H7 521 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 APOPT1Q96IL0 206 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 OLFM1Q99784 485 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 SPATA16Q9BXB7 569 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 C2orf42Q9NWW7 574 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 MKS1Q9NXB0 559 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 CRLS1Q9UJA2 301 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 SMG5Q9UPR3 1016 aaKnown RBP27.3■■□□□ 1.96
CPNE1-203ENST00000397442 VPS9D1Q9Y2B5 631 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 UBA6A0AVT1 1052 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-203ENST00000397442 FAM170BA6NMN3 283 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 GABRG2P18507 467 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 SAT1P21673 171 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 GMPRP36959 345 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 PTGER3P43115 390 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 ADARP55265 1226 aaKnown RBP27.3■■□□□ 1.96
CPNE1-203ENST00000397442 TIAL1Q01085 375 aaKnown RBP eCLIP27.3■■□□□ 1.961e-6■■■■■ 29.1
CPNE1-203ENST00000397442 ITGA9Q13797 1035 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 CDHR3Q6ZTQ4 885 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 SYT13Q7L8C5 426 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 TRAM1L1Q8N609 369 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 CXorf40AQ8TE69 158 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 P2RY12Q9H244 342 aa27.3■■□□□ 1.96
CPNE1-203ENST00000397442 FAM47DPA6NHR8 397 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 PLRG1O43660 514 aaKnown RBP27.29■■□□□ 1.96
CPNE1-203ENST00000397442 C2P06681 752 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 RPA3P35244 121 aaPredicted RBP27.29■■□□□ 1.96
CPNE1-203ENST00000397442 SLC18A1P54219 525 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 CDKN2DP55273 166 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 DENND1AQ8TEH3 1009 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 GANCQ8TET4 914 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 NELL2Q99435 816 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 AARSD1Q9BTE6 412 aaKnown RBP27.29■■□□□ 1.96
CPNE1-203ENST00000397442 BOCQ9BWV1 1114 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 CNOT10Q9H9A5 744 aaKnown RBP27.29■■□□□ 1.96
CPNE1-203ENST00000397442 SMOXQ9NWM0 555 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 MUTYHQ9UIF7 546 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 MED16Q9Y2X0 877 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 VWA7Q9Y334 891 aa27.29■■□□□ 1.96
CPNE1-203ENST00000397442 FADS2P1A8MWK0 482 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 PFDN6O15212 129 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 PHGDHO43175 533 aaKnown RBP27.28■■□□□ 1.96
CPNE1-203ENST00000397442 TOP3BO95985 862 aaKnown RBP27.28■■□□□ 1.96
CPNE1-203ENST00000397442 FMO4P31512 558 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 RAB10P61026 200 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 TTC31Q49AM3 519 aaPredicted RBP27.28■■□□□ 1.96
CPNE1-203ENST00000397442 CTSL3PQ5NE16 218 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 LYPLAL1Q5VWZ2 237 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 USP30Q70CQ3 517 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 ZNF765Q7L2R6 523 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 FLCNQ8NFG4 579 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 AP2M1Q96CW1 435 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 ZSCAN5AQ9BUG6 496 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 SLC13A1Q9BZW2 595 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 FZD4Q9ULV1 537 aa27.28■■□□□ 1.96
CPNE1-203ENST00000397442 NUMA1Q14980 2115 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms