RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 OAS3Q9Y6K5 1087 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CSNK1G3Q9Y6M4 447 aa21.04■□□□□ 0.96
TSPAN4-206ENST00000397408 CACNA1AO00555 2505 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 GLYATL1P3A0A0U1RQE8 302 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 TRIM38O00635 465 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 ASMTLO95671 621 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 ECEL1O95672 775 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 GAS8O95995 478 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 GIMD1P0DJR0 217 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 ALPPL2P10696 532 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 PAFAH1B1P43034 410 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 TERF1P54274 439 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 PDE1BQ01064 536 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 TRIP6Q15654 476 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 HS1BP3Q53T59 392 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 FSTL5Q8N475 847 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 OR13C4Q8NGS5 318 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 OR4C6Q8NH72 309 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 GLYATL1Q969I3 302 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 CLPBQ9H078 707 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 CASS4Q9NQ75 786 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 NLGN3Q9NZ94 848 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 SUFUQ9UMX1 484 aa21.03■□□□□ 0.96
TSPAN4-206ENST00000397408 GOLGA4Q13439 2230 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 LDB2O43679 373 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 IVLP07476 585 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 GNPDA1P46926 289 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 SIM1P81133 766 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 TMPRSS15P98073 1019 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 ELOCQ15369 112 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 CHRNA6Q15825 494 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 DEFB133Q30KQ1 61 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 ATP13A5Q4VNC0 1218 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 MARK2Q7KZI7 788 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 PHYKPLQ8IUZ5 450 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 CNDP2Q96KP4 475 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 ARFGAP3Q9NP61 516 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 RNF14Q9UBS8 474 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 FKBPLQ9UIM3 349 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 NEU2Q9Y3R4 380 aa21.02■□□□□ 0.96
TSPAN4-206ENST00000397408 ZNF106Q9H2Y7 1883 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 COL5A1P20908 1838 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 LMO7DNF2Z398 122 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 GAPDHSO14556 408 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 GPR39O43194 453 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 SIGLEC6O43699 453 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 SLC25A14O95258 325 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 LDOC1O95751 146 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 FUCA1P04066 466 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 ANXA6P08133 673 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 CERCAMQ5T4B2 595 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 DNAJC1Q96KC8 554 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 TMEM168Q9H0V1 697 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 VPS18Q9P253 973 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 DOLKQ9UPQ8 538 aa21.01■□□□□ 0.95
TSPAN4-206ENST00000397408 PRAMEF1O95521 474 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 TPSB2P20231 275 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 PPP1R7Q15435 360 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 TPSAB1Q15661 275 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 CCDC38Q502W7 563 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 ZNF648Q5T619 568 aaPredicted RBP21■□□□□ 0.95
TSPAN4-206ENST00000397408 GLRX5Q86SX6 157 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 KLHL7Q8IXQ5 586 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 DTX3LQ8TDB6 740 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 SCARF2Q96GP6 870 aaPredicted RBP21■□□□□ 0.95
TSPAN4-206ENST00000397408 VPS35Q96QK1 796 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 DUSP23Q9BVJ7 150 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 TMPRSS11EQ9UL52 423 aa21■□□□□ 0.95
TSPAN4-206ENST00000397408 TCRBV7S3A2A0A539 114 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 CCDC78A2IDD5 438 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 CCL22O00626 93 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 TPP1O14773 563 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 TNFSF14O43557 240 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A9O60656 530 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 MTX2O75431 263 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A6P19224 532 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A1P22309 533 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A4P22310 534 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A3P35503 534 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A5P35504 534 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 HADHAP40939 763 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 CDK16Q00536 496 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 ITGA9Q13797 1035 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 KCNJ11Q14654 390 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 PROX2Q3B8N5 592 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 GKN2Q86XP6 184 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 GALNT13Q8IUC8 556 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 CCL4L1Q8NHW4 92 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 GDAP1Q8TB36 358 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 OR2M4Q96R27 311 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A7Q9HAW7 530 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A10Q9HAW8 530 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 UGT1A8Q9HAW9 530 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 PCYOX1Q9UHG3 505 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 APPL1Q9UKG1 709 aa20.99■□□□□ 0.95
TSPAN4-206ENST00000397408 YY2O15391 372 aa20.98■□□□□ 0.95
TSPAN4-206ENST00000397408 DNAJC6O75061 913 aa20.98■□□□□ 0.95
TSPAN4-206ENST00000397408 MAGEA6P43360 314 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms