RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ELMO2Q96JJ3 720 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 COQ10AQ96MF6 247 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 OMDQ99983 421 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 IER2Q9BTL4 223 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 CAPS2Q9BXY5 557 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 SYTL2Q9HCH5 934 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 POLMQ9NP87 494 aaPredicted RBP18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 ZDHHC4Q9NPG8 344 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 PSD3Q9NYI0 1048 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 SLC17A6Q9P2U8 582 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 GNPTGQ9UJJ9 305 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 ACOT9Q9Y305 439 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 FADS3Q9Y5Q0 445 aa18.91■□□□□ 0.62
TSPAN4-204ENST00000397404 OR51F1A6NGY5 319 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 GAPDHSO14556 408 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 DRD3P35462 400 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 LIG3P49916 1009 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CNTN1Q12860 1018 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 MAP7D1Q3KQU3 841 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 LDLRAP1Q5SW96 308 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CNSTQ6PJW8 725 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 RAPH1Q70E73 1250 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TMPRSS6Q8IU80 811 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 GPATCH11Q8N954 259 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 GPR26Q8NDV2 337 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 RPLP0P6Q8NHW5 317 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 SMIM14Q96QK8 99 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 COPS8Q99627 209 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 AARSD1Q9BTE6 412 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TSSK1BQ9BXA7 367 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 C1QTNF7Q9BXJ2 289 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CLPBQ9H078 707 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CCDC134Q9H6E4 229 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CD248Q9HCU0 757 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PREBQ9HCU5 417 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 ZDHHC3Q9NYG2 299 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 IGLV3-16A0A075B6K0 115 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 A0A096LPK6 155 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CCL22O00626 93 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 MID1O15344 667 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 RRP9O43818 475 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 ACADMP11310 421 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PKMP14618 531 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 CHN1P15882 459 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TEAD1P28347 426 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TFF2Q03403 129 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PDE1CQ14123 709 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 ACOX1Q15067 660 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 FAM83EQ2M2I3 478 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 HECTD2Q5U5R9 776 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 AGBL4Q5VU57 503 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PSAPL1Q6NUJ1 521 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TBC1D1Q86TI0 1168 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 SERPINA9Q86WD7 417 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 TRIM42Q8IWZ5 723 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 HDDC3Q8N4P3 179 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 DENND1AQ8TEH3 1009 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 DYDC1Q8WWB3 177 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 SREK1Q8WXA9 508 aaKnown RBP18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 ASB12Q8WXK4 309 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 SIPA1Q96FS4 1042 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 SPATA16Q9BXB7 569 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 VPS11Q9H270 941 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PCMTD2Q9NV79 361 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 FBXL21Q9UKT6 434 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 PLLPQ9Y342 182 aa18.9■□□□□ 0.62
TSPAN4-204ENST00000397404 KANSL1LA0AUZ9 987 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 SHISA7A6NL88 538 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 VPS26AO75436 327 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 AP2A2O94973 939 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 C2P06681 752 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 FDXRP22570 491 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 CHRNA6Q15825 494 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 SETMARQ53H47 684 aaPredicted RBP18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 KLC3Q6P597 504 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 SYT13Q7L8C5 426 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 HSD11B1LQ7Z5J1 315 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 CLEC14AQ86T13 490 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 PIANPQ8IYJ0 282 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 RDH11Q8TC12 318 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 ZBTB9Q96C00 473 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 ATXN7L3BQ96GX2 97 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 PANX3Q96QZ0 392 aa18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 ZCCHC2Q9C0B9 1178 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-204ENST00000397404 UBA6A0AVT1 1052 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 PLRG1O43660 514 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 LZTS3O60299 673 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 SHOX2O60902 331 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 TM7SF2O76062 418 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 GSTM1P09488 218 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 CHRNB1P11230 501 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 C6P13671 934 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 WASP42768 502 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 ATP1A2P50993 1020 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 RPS21P63220 83 aaKnown RBP18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 GSTM4Q03013 218 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 SEMA3AQ14563 771 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 AGAP9Q5VTM2 703 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 HHATQ5VTY9 493 aa18.88■□□□□ 0.61
TSPAN4-204ENST00000397404 MACC1Q6ZN28 852 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms