RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TRBC1P01850 177 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 ACADMP11310 421 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 NQO1P15559 274 aaKnown RBP14.85□□□□□ -0.03
CAPN3-207ENST00000397200 TIMP2P16035 220 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 CTPS1P17812 591 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 GABRG2P18507 467 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 NDUFV2P19404 249 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 AOC1P19801 751 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 ARFIP2P53365 341 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 MTAPQ13126 283 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 POU6F1Q14863 301 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 PPM1JQ5JR12 505 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 C16orf46Q6P387 395 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 CYB5D1Q6P9G0 228 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 USP45Q70EL2 814 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 ERN2Q76MJ5 926 aaKnown RBP14.85□□□□□ -0.03
CAPN3-207ENST00000397200 CMC1Q7Z7K0 106 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 TTC7BQ86TV6 843 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 PGBD3Q8N328 593 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 GANCQ8TET4 914 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 MRGPRX1Q96LB2 322 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 SIKE1Q9BRV8 207 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 TMEM120AQ9BXJ8 343 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 HDAC8Q9BY41 377 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 LRMDAQ9H2I8 198 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 THAP1Q9NVV9 213 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 C2orf42Q9NWW7 574 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.85□□□□□ -0.03
CAPN3-207ENST00000397200 COPG2Q9UBF2 871 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 SCML1Q9UN30 329 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 ANKRD6Q9Y2G4 727 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 CAPN8A6NHC0 703 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PLK4O00444 970 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PI15O43692 258 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 MGRN1O60291 552 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 RNASEH2AO75792 299 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ALPIP09923 528 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PIRTP0C851 137 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ADRB3P13945 408 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 CNTN1Q12860 1018 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 STX3Q13277 289 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SMAD1Q15797 465 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 LRRC73Q5JTD7 316 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ESRP1Q6NXG1 681 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ERAP2Q6P179 960 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 CLNKQ7Z7G1 428 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 HDDC3Q8N4P3 179 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 AADATQ8N5Z0 425 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 BLOC1S5Q8TDH9 187 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 INPP5DQ92835 1189 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 HHIPQ96QV1 700 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 OMDQ99983 421 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 C20orf27Q9GZN8 174 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 DCTN4Q9UJW0 460 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PPIL1Q9Y3C6 166 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 A0A096LPK6 155 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 A0A1W2PP55 124 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 HEATR9A2RTY3 570 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 HNRNPCL1O60812 293 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SERPINE1P05121 402 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 C2P06681 752 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 T-ENOLP0DO92 83 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 C7P10643 843 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 CYP2A6P11509 494 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PAMP19021 973 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 GRK2P25098 689 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 GABRB3P28472 473 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 DRD3P35462 400 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 P2RY2P41231 377 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ABL2P42684 1182 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SUOXP51687 545 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 CLCN5P51795 746 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ELF3P78545 371 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ANO7Q6IWH7 933 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 KIAA0408Q6ZU52 694 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 GALNT7Q86SF2 657 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PLD6Q8N2A8 252 aaKnown RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 C2CD4AQ8NCU7 369 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 RAB7BQ96AH8 199 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 KLHL29Q96CT2 875 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SCRN2Q96FV2 425 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 SMIM14Q96QK8 99 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 MCCC1Q96RQ3 725 aaPredicted RBP14.84□□□□□ -0.03
CAPN3-207ENST00000397200 FAM167BQ9BTA0 163 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 C1QTNF1Q9BXJ1 281 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 MAGEE1Q9HCI5 957 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 PCDH12Q9NPG4 1184 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 KLC4Q9NSK0 619 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 FBXL12Q9NXK8 326 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 HACD3Q9P035 362 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 LNPEPQ9UIQ6 1025 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 ZFP69BQ9UJL9 534 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 NCKAP1Q9Y2A7 1128 aa14.84□□□□□ -0.03
CAPN3-207ENST00000397200 A0A0G2JND7 137 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 APBB3O95704 486 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 HNRNPH1P31943 449 aaKnown RBP14.83□□□□□ -0.04
CAPN3-207ENST00000397200 HNF1BP35680 557 aa14.83□□□□□ -0.04
CAPN3-207ENST00000397200 CXCL12P48061 93 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms