RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SLC9B1Q4ZJI4 515 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 DUPD1Q68J44 220 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 VTCN1Q7Z7D3 282 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 UBE2Q1Q7Z7E8 422 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 MAFIPQ8WZ33 124 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 ACSS2Q9NR19 701 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
SMU1-201ENST00000397149 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
SMU1-201ENST00000397149 AURKAO14965 403 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 KCNQ2O43526 872 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 SNAP91O60641 907 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 PSMD8P48556 350 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 IKBKEQ14164 716 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 LCN1P1Q5VSP4 162 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 CCDC80Q76M96 950 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 NUP54Q7Z3B4 507 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 CD101Q93033 1021 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 DGCR14Q96DF8 476 aaKnown RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 PDP1Q9P0J1 537 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 H3BRB1 525 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TRAPPC6AO75865 159 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 ECHDC2Q86YB7 292 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 RAVER1Q8IY67 606 aaKnown RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 PPP3R2Q96LZ3 170 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 CTPS2Q9NRF8 586 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TVP23AA6NH52 213 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 BCAS1O75363 584 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 PROSCO94903 275 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 IFI35P80217 286 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 BEX3Q00994 111 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 LARS2Q15031 903 aaKnown RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 GTPBP3Q969Y2 492 aaKnown RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 ADAM2Q99965 735 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 ULBP1Q9BZM6 244 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 UCK2Q9BZX2 261 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 SPAG4Q9NPE6 437 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 GSKIPQ9P0R6 139 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 COPS7AQ9UBW8 275 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TRHDEQ9UKU6 1024 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 CLDN4O14493 209 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMU1-201ENST00000397149 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 TYSND1Q2T9J0 566 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 OSBPL2Q9H1P3 480 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
SMU1-201ENST00000397149 CCNCP24863 283 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 PRKAA2P54646 552 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 ODF4Q2M2E3 257 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 PLPP4Q5VZY2 271 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 OR5M3Q8NGP4 307 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 TSSK3Q96PN8 268 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 SEC61A2Q9H9S3 476 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 VNN3Q9NY84 501 aa12.29□□□□□ -0.44
SMU1-201ENST00000397149 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CHST10O43529 356 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 GABBR2O75899 941 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SLC1A2P43004 574 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 AP3S2P59780 193 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 BATFQ16520 125 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 KLHL35Q6PF15 583 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SYVN1Q86TM6 617 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 OR14C36Q8NHC7 312 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 KCTD4Q8WVF5 259 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 LGMNQ99538 433 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ZNF69Q9UC07 566 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ATP10AO60312 1499 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 TRBC1P01850 177 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 EFNA1P20827 205 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 CLCN7P51798 805 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 HSPB3Q12988 150 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 LACTB2Q53H82 288 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 HECTD3Q5T447 861 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 ZNF782Q6ZMW2 699 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 C16orf86Q6ZW13 317 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 ANKS1BQ7Z6G8 1248 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 WDR49Q8IV35 697 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 NSUN4Q96CB9 384 aaKnown RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 MCCC1Q96RQ3 725 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 SSX3Q99909 188 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 PLK2Q9NYY3 685 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 SPATA7Q9P0W8 599 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 DNPEPQ9ULA0 475 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CYP3A4P08684 503 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 INSRRP14616 1297 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 PECAM1P16284 738 aaPredicted RBP12.28□□□□□ -0.44
SMU1-201ENST00000397149 HSD11B1P28845 292 aa12.28□□□□□ -0.44
SMU1-201ENST00000397149 CCKBRP32239 447 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms