RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FCRL5Q96RD9 977 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 HERPUD2Q9BSE4 406 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 RIOK2Q9BVS4 552 aaKnown RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 TMEM168Q9H0V1 697 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 FAM83DQ9H4H8 585 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 CARS2Q9HA77 564 aaKnown RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 TRNAU1APQ9NX07 287 aaKnown RBP14.49□□□□□ -0.09
SEC13-208ENST00000397109 GULP1Q9UBP9 304 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 DKK4Q9UBT3 224 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 ZMIZ1Q9ULJ6 1067 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 SLC17A4Q9Y2C5 497 aa14.49□□□□□ -0.09
SEC13-208ENST00000397109 ARHGEF17Q96PE2 2063 aaPredicted RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 USP24Q9UPU5 2620 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 SPEGQ15772 3267 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 MYLKQ15746 1914 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 PGRMC1O00264 195 aaKnown RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 STK10O94804 968 aaKnown RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 SOD1P00441 154 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 NFKB1P19838 968 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 WNT3AP56704 352 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 EIF3EP60228 445 aaKnown RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 OTUD4Q01804 1114 aaKnown RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 SEL1L2Q5TEA6 688 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 KCTD16Q68DU8 428 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 ITPRIPL1Q6GPH6 555 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 AADACL2Q6P093 401 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 LYSMD3Q7Z3D4 306 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 MARCH9Q86YJ5 346 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 CDKL3Q8IVW4 592 aaPredicted RBP14.48□□□□□ -0.09
SEC13-208ENST00000397109 TTC13Q8NBP0 860 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 FAM46DQ8NEK8 389 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.48□□□□□ -0.09
SEC13-208ENST00000397109 DEPDC7Q96QD5 511 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 GSDMCQ9BYG8 508 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 GPR63Q9BZJ6 419 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 UBP1Q9NZI7 540 aa14.48□□□□□ -0.09
SEC13-208ENST00000397109 LOC285095A0A1B0GVY8 99 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 CAPNS1P04632 268 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 RBP3P10745 1247 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 RBL1P28749 1068 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 CXCR5P32302 372 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 CLDN6P56747 220 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 ILF3Q12906 894 aaKnown RBP eCLIP14.47□□□□□ -0.091e-6■■■□□ 15.7
SEC13-208ENST00000397109 MPP3Q13368 585 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 TCEA2Q15560 299 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 FAM182AQ5T1J6 154 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 HENMT1Q5T8I9 393 aaKnown RBP14.47□□□□□ -0.09
SEC13-208ENST00000397109 CDCP2Q5VXM1 449 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 DARS2Q6PI48 645 aaKnown RBP14.47□□□□□ -0.09
SEC13-208ENST00000397109 OGFOD3Q6PK18 319 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 KDELC1Q6UW63 502 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 TMC3Q7Z5M5 1100 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 SLC13A5Q86YT5 568 aaPredicted RBP14.47□□□□□ -0.09
SEC13-208ENST00000397109 EIF1ADQ8N9N8 165 aaKnown RBP14.47□□□□□ -0.09
SEC13-208ENST00000397109 GPR156Q8NFN8 814 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 GPBAR1Q8TDU6 330 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 NXPE2Q96DL1 559 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 SCARF2Q96GP6 870 aaPredicted RBP14.47□□□□□ -0.09
SEC13-208ENST00000397109 COX14Q96I36 57 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 NRSN2Q9GZP1 204 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 TRABDQ9H4I3 376 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 SIRPGQ9P1W8 387 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 RSPH14Q9UHP6 348 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 SUFUQ9UMX1 484 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 ZNF711Q9Y462 761 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 APC2O95996 2303 aa14.47□□□□□ -0.09
SEC13-208ENST00000397109 ANXA9O76027 345 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 TNFRSF8P28908 595 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 GNPDA1P46926 289 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 GEMP55040 296 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 DCDC1P59894 354 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 KYQ8NBH2 561 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 PPP1R2P1Q96PQ5 205 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 AGAP2Q99490 1192 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 GBA3Q9H227 469 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 DPEP2Q9H4A9 486 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 HACD3Q9P035 362 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 NFKBIL1Q9UBC1 381 aaPredicted RBP14.46□□□□□ -0.09
SEC13-208ENST00000397109 SHOC2Q9UQ13 582 aa14.46□□□□□ -0.09
SEC13-208ENST00000397109 INPP4BO15327 924 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 CEP104O60308 925 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 TCEA3O75764 348 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 ASMTLO95671 621 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 FUCA1P04066 466 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 RHOXF2BP0C7M4 288 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 PIRTP0C851 137 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 HLA-DPA1P20036 260 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 ADCY8P40145 1251 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 POLD2P49005 469 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 PRPSAP1Q14558 356 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 RTP5Q14D33 572 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 PERM1Q5SV97 790 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 DOK6Q6PKX4 331 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 PROSER1Q86XN7 944 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 CCL4L1Q8NHW4 92 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 OXNAD1Q96HP4 312 aaPredicted RBP14.45□□□□□ -0.1
SEC13-208ENST00000397109 MRGPRX2Q96LB1 330 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 OR2M4Q96R27 311 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms