RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 IRS1P35568 1242 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 HERVK_113P63132 956 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SETMARQ53H47 684 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 FAM151BQ6UXP7 276 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 C7orf61Q8IZ16 206 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 RHEBL1Q8TAI7 183 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 STON2Q8WXE9 905 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 HERVK_113Q902F9 699 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 LMLNQ96KR4 655 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 THTPAQ9BU02 230 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 ERVK-6Q9BXR3 956 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 TDP1Q9NUW8 608 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 RNF112Q9ULX5 631 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 LOC100653049A0A140TA62 436 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 LINC01553A4QN01 128 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 E5RI56 91 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 MAGEC1O60732 1142 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 KRT34O76011 436 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 PENKP01210 267 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 GFAPP14136 432 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SLC25A3Q00325 362 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SIDT2Q8NBJ9 832 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 TRMOQ9BU70 441 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 BBS2Q9BXC9 721 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 GALPQ9UBC7 116 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SUPT3HB4E1H0 165 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 GRM6O15303 877 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SUPT3HO75486 399 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 COX4I1P13073 169 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 TSPAN8P19075 237 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 PRDX6P30041 224 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 PTGER3P43115 390 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 ATP6V0D1P61421 351 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 NTHL1P78549 312 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 C22orf39Q6P5X5 142 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SCUBE1Q8IWY4 988 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 STK40Q8N2I9 435 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 NKAPQ8N5F7 415 aaKnown RBP12.07□□□□□ -0.48
ITGB1-202ENST00000396033 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 KIAA1191Q96A73 305 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 ATOH8Q96SQ7 321 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 RNPEPL1Q9HAU8 725 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 TNFRSF12AQ9NP84 129 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 SLC25A13Q9UJS0 675 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
ITGB1-202ENST00000396033 KERAO60938 352 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 TM7SF2O76062 418 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 PRAMEF1O95521 474 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 SYN1P17600 705 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CHRM3P20309 590 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 HNF1BP35680 557 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CPOXP36551 454 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 PPARGP37231 505 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 GALNT1Q10472 559 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CUL3Q13618 768 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 UNC50Q53HI1 259 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 TMEM198Q66K66 360 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ULK2Q8IYT8 1036 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 STAG3L4Q8TBR4 150 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 RSRC1Q96IZ7 334 aaKnown RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CLPTM1LQ96KA5 538 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 MARK4Q96L34 752 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 SARS2Q9NP81 518 aaKnown RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 NPEPPSL1A6NEC2 478 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CAPN8A6NHC0 703 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 SDHDO14521 159 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 XYLBO75191 536 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CIB2O75838 187 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 PIK3R1P27986 724 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 RPS6KA3P51812 740 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 RAP1GDS1P52306 607 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 UBE3AQ05086 875 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 TSNQ15631 228 aaKnown RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ASTLQ6HA08 431 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 RTL10Q7L3V2 364 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 IKZF3Q9UKT9 509 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 HS3ST2Q9Y278 367 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 GBF1Q92538 1859 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 H0Y3Z8 333 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 BTN3A1O00481 513 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
ITGB1-202ENST00000396033 CLDN7O95471 211 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ESR1P03372 595 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 BTKQ06187 659 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 PDE4DIPQ5VU43 2346 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 UBE2Q1Q7Z7E8 422 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ZSWIM9Q86XI8 627 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 KCNJ9Q92806 393 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 COMMD10Q9Y6G5 202 aa12.06□□□□□ -0.48
ITGB1-202ENST00000396033 ALPK3Q96L96 1907 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms