RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLC1A1P43005 524 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 AP1B1Q10567 949 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SPIDRQ14159 915 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 C16orf72Q14CZ0 275 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 TEX44Q53QW1 395 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 NKAIN2Q5VXU1 208 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 RAD9BQ6WBX8 426 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 MICALCLQ6ZW33 695 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 USP53Q70EK8 1073 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 ZNF761Q86XN6 746 aaPredicted RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 CNGA4Q8IV77 575 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 RHOT1Q8IXI2 618 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 NRSN1Q8IZ57 195 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 WDR36Q8NI36 951 aaKnown RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 ZDHHC1Q8WTX9 485 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 PMEPA1Q969W9 287 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 OXNAD1Q96HP4 312 aaPredicted RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 TEKT5Q96M29 485 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 GFM1Q96RP9 751 aaKnown RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 MLPHQ9BV36 600 aaPredicted RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 TRIM5Q9C035 493 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 LACRTQ9GZZ8 138 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SLC25A51Q9H1U9 297 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SYNDIG1Q9H7V2 258 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 RDH14Q9HBH5 336 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 KCTD5Q9NXV2 234 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 GOLGA6AQ9NYA3 693 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 UBP1Q9NZI7 540 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 TMEM9Q9P0T7 183 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SEPT10Q9P0V9 454 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SLC23A2Q9UGH3 650 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 LCMT1Q9UIC8 334 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 SHOC2Q9UQ13 582 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 PCDHA13Q9Y5I0 950 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 HEMK1Q9Y5R4 338 aaPredicted RBP8.79□□□□□ -1
ATG4A-205ENST00000394892 MYLKQ15746 1914 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
ATG4A-205ENST00000394892 PDE2AO00408 941 aaPredicted RBP8.78□□□□□ -1
ATG4A-205ENST00000394892 PLD2O14939 933 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 SLC28A2O43868 658 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 CST8O60676 142 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 CCL4P13236 92 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 PNLIPP16233 465 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 BPIP17213 487 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
ATG4A-205ENST00000394892 SLC5A2P31639 672 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ACTR1BP42025 376 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 CHRNA4P43681 627 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 EPHB1P54762 984 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 INHBCP55103 352 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ACTR1AP61163 376 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 CDK18Q07002 472 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ILF3Q12906 894 aaKnown RBP eCLIP8.78□□□□□ -1
ATG4A-205ENST00000394892 CLN3Q13286 438 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 LY6DQ14210 128 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 PDK1Q15118 436 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 TGIF1Q15583 401 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ZFYVE27Q5T4F4 411 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 KAZNQ674X7 775 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 AADACL2Q6P093 401 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 RAB11FIP2Q7L804 512 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 TMC3Q7Z5M5 1100 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 TMEM139Q8IV31 216 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 KATNAL2Q8IYT4 538 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ZNF567Q8N184 647 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 TTC30BQ8N4P2 665 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 EXD1Q8NHP7 514 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 WDR48Q8TAF3 677 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 HAUS1Q96CS2 278 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 OR2M4Q96R27 311 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 HEMGNQ9BXL5 484 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 GSDMCQ9BYG8 508 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 FAM117AQ9C073 453 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 FAM83DQ9H4H8 585 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 WDR70Q9NW82 654 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
ATG4A-205ENST00000394892 FOXJ2Q9P0K8 574 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
ATG4A-205ENST00000394892 ATXN10Q9UBB4 475 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 TBC1D29Q9UFV1 150 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 KALRNO60229 2985 aa8.78□□□□□ -1
ATG4A-205ENST00000394892 ASH1LQ9NR48 2969 aaKnown RBP8.78□□□□□ -1
ATG4A-205ENST00000394892 IGHV1OR21-1A0A087WYE8 117 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 A0A0A6YYK5 440 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-205ENST00000394892 PRAMEF33A0A0G2JMD5 474 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 IGHV5-10-1A0A0J9YXX1 117 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 LOC285095A0A1B0GVY8 99 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 C9orf172C9J069 976 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 GAPDHSO14556 408 aaPredicted RBP8.77□□□□□ -1.01
ATG4A-205ENST00000394892 ARHGAP6O43182 974 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 GPR39O43194 453 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 PSTPIP1O43586 416 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 SPOPO43791 374 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 MTX2O75431 263 aa8.77□□□□□ -1.01
ATG4A-205ENST00000394892 PMPCBO75439 489 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms