RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 CDH18Q13634 790 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 TSNQ15631 228 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 AGKQ53H12 422 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 CTSL3PQ5NE16 218 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 REP15Q6BDI9 236 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 WFDC5Q8TCV5 224 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 USP13Q92995 863 aaPredicted RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 FUBP1Q96AE4 644 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 MIEF2Q96C03 454 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 TMA16Q96EY4 203 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 C3orf30Q96M34 536 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 NSUN5Q96P11 429 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 SPG21Q9NZD8 308 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 MAFFQ9ULX9 164 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 PSMD13Q9UNM6 376 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 COMMD10Q9Y6G5 202 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 HELZP42694 1942 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 A6NHS1 94 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ZBBXA8MT70 800 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 PPP6CO00743 305 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 FBP2O00757 339 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 SCAMP3O14828 347 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 KLK8O60259 260 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ECI2O75521 394 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 TSPAN12O95859 305 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 RPS17P08708 135 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 NAA20P61599 178 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 AP1S1P61966 158 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 LCP2Q13094 533 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 LRP8Q14114 963 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 PABPC1LQ4VXU2 614 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 ZRANB3Q5FWF4 1079 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 FAM219BQ5XKK7 198 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ZFP1Q6P2D0 407 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ITIH5Q86UX2 942 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 PDSS2Q86YH6 399 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ARL14EPQ8N8R7 260 aaPredicted RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 MICAL1Q8TDZ2 1067 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 UCMAQ8WVF2 138 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 TWIST2Q8WVJ9 160 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 KCNJ9Q92806 393 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 SLC30A3Q99726 388 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 SLC25A23Q9BV35 468 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 C1QTNF3Q9BXJ4 246 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 BPIFA1Q9NP55 256 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 IL23AQ9NPF7 189 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 CCDC167Q9P0B6 97 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 IL17CQ9P0M4 197 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 GALPQ9UBC7 116 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 TRMT6Q9UJA5 497 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 FCF1Q9Y324 198 aaKnown RBP18.49■□□□□ 0.55
SIL1-202ENST00000394817 ZNF711Q9Y462 761 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 PCDHGA7Q9Y5G6 932 aa18.49■□□□□ 0.55
SIL1-202ENST00000394817 ATP6AP2A0A1C7CYW4 349 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 STX16-NPEPL1H3BU86 382 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 STX16O14662 325 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 OR1I1O60431 355 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 EFCAB14O75071 495 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 NIPSNAP2O75323 286 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 ATP6AP2O75787 350 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 BCAS2O75934 225 aaPredicted RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 SNRPB2P08579 225 aaKnown RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 ALDOCP09972 364 aaKnown RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 PEX2P28328 305 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 EEF1DP29692 281 aaKnown RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 CLCQ05315 142 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 CD200R1Q8TD46 325 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 DLG3Q92796 817 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 AKTIPQ9H8T0 292 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 MAGEE1Q9HCI5 957 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 GEMIN8Q9NWZ8 242 aaKnown RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 C6orf203Q9P0P8 240 aaPredicted RBP18.48■□□□□ 0.55
SIL1-202ENST00000394817 PCDHB9Q9Y5E1 797 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 CPQQ9Y646 472 aa18.48■□□□□ 0.55
SIL1-202ENST00000394817 NPEPPSL1A6NEC2 478 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 EIF4E1BA6NMX2 242 aaKnown RBP18.47■□□□□ 0.55
SIL1-202ENST00000394817 CDC7O00311 574 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 BTN3A1O00481 513 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 TRIM38O00635 465 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 BAIAP3O94812 1187 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 ESR1P03372 595 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 PTGER3P43115 390 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 FOXA1P55317 472 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 STX1BP61266 288 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 PSME3P61289 254 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 PTPRRQ15256 657 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 GEN1Q17RS7 908 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 MMEL1Q495T6 779 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 ATXN7L2Q5T6C5 722 aaPredicted RBP18.47■□□□□ 0.55
SIL1-202ENST00000394817 TXNDC8Q6A555 127 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 STK40Q8N2I9 435 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 PQLC1Q8N2U9 271 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 TRPC4APQ8TEL6 797 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 GDPD5Q8WTR4 605 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 MYO19Q96H55 970 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 NR1H4Q96RI1 486 aaPredicted RBP18.47■□□□□ 0.55
SIL1-202ENST00000394817 KLHL4Q9C0H6 718 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 FBRSL1Q9HCM7 1045 aaKnown RBP18.47■□□□□ 0.55
SIL1-202ENST00000394817 PKP3Q9Y446 797 aa18.47■□□□□ 0.55
SIL1-202ENST00000394817 CARNS1A5YM72 827 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms