RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CPNE9Q8IYJ1 553 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 FIBINQ8TAL6 211 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 HMGCLL1Q8TB92 370 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 MICAL1Q8TDZ2 1067 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 RCN3Q96D15 328 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 L3HYPDHQ96EM0 354 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CCDC28BQ9BUN5 200 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 EML4Q9HC35 981 aaKnown RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 CDH22Q9UJ99 828 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CORO1CQ9ULV4 474 aaPredicted RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 RNF112Q9ULX5 631 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 PKP3Q9Y446 797 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 C1orf232A0A0U1RR37 186 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 F8W8V4 182 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 BTN3A1O00481 513 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 GAPDHSO14556 408 aaPredicted RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 MOSPD3O75425 235 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ECI2O75521 394 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CDK14O94921 469 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 TSPAN12O95859 305 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 GLUD1P00367 558 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 IRS1P35568 1242 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 HMGCLP35914 325 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 TBL3Q12788 808 aaKnown RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 CCDC6Q16204 474 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 LRRC73Q5JTD7 316 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 GK5Q6ZS86 529 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 NET1Q7Z628 596 aaPredicted RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 CPSF7Q8N684 471 aaKnown RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 CLDN19Q8N6F1 224 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CEP70Q8NHQ1 597 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 STMN2Q93045 179 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ARMC5Q96C12 935 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ZNF570Q96NI8 536 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 TCF12Q99081 682 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ABCG8Q9H221 673 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 UTP6Q9NYH9 597 aaKnown RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 KIAA1522Q9P206 1035 aaPredicted RBP14.98□□□□□ -0.01
GPC3-202ENST00000394299 SLCO3A1Q9UIG8 710 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 ARHGAP26Q9UNA1 814 aa14.98□□□□□ -0.01
GPC3-202ENST00000394299 TRPC5OSA6NMA1 111 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 STX16-NPEPL1H3BU86 382 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CLASP2O75122 1294 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 CIB2O75838 187 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ARHGEF15O94989 841 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 HK2P52789 917 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ACTR3P61158 418 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 RAD51Q06609 339 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CYLC2Q14093 348 aaPredicted RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 UGT3A2Q3SY77 523 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 PGM2L1Q6PCE3 622 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 RFLNAQ6ZTI6 216 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ELMOD1Q8N336 334 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CPXM2Q8N436 756 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CD200R1Q8TD46 325 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 POF1BQ8WVV4 589 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 KIAA1191Q96A73 305 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 FUBP1Q96AE4 644 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 NPAS2Q99743 824 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 RTKNQ9BST9 563 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 TFB2MQ9H5Q4 396 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 SYTL2Q9HCH5 934 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 MAGEE1Q9HCI5 957 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 MID1IP1Q9NPA3 183 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 SEMA4BQ9NPR2 832 aaPredicted RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 ASB1Q9Y576 335 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 INSL6Q9Y581 213 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 OAS3Q9Y6K5 1087 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 PRSS21Q9Y6M0 314 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CFLARO15519 480 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 THRAP10827 490 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 SRCP12931 536 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 EEF1DP29692 281 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 PRDX3P30048 256 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 CTNNB1P35222 781 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 TTPAP49638 278 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 HK3P52790 923 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 AP1S1P61966 158 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 CBX2Q14781 532 aaPredicted RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 PITRM1Q5JRX3 1037 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 PELI3Q8N2H9 469 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 RNF148Q8N7C7 305 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 MRPL43Q8N983 215 aaKnown RBP14.97□□□□□ -0.01
GPC3-202ENST00000394299 ACTRT2Q8TDY3 377 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ACDQ96AP0 544 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 LINGO1Q96FE5 620 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ZSWIM3Q96MP5 696 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 C17orf80Q9BSJ5 609 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 DERL2Q9GZP9 239 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 MEAF6Q9HAF1 191 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ZFYVE1Q9HBF4 777 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 POPDC3Q9HBV1 291 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 ZBTB26Q9HCK0 441 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 MAFFQ9ULX9 164 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 DNAJC15Q9Y5T4 150 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 SLC30A1Q9Y6M5 507 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 XIRP2A4UGR9 3374 aa14.97□□□□□ -0.01
GPC3-202ENST00000394299 A0A0J9YYE9 177 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms