RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 ERLIN1O75477 346 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ELFN1P0C7U0 828 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 PNLIPP16233 465 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 TRIM23P36406 574 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ARSEP51690 589 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ZNF135P52742 658 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 B4GALNT1Q00973 533 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 BCL2L1Q07817 233 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ARHGEF7Q14155 803 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 DPYSL2Q16555 572 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 PHF19Q5T6S3 580 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 AFMIDQ63HM1 303 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 WDR93Q6P2C0 686 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 BBS12Q6ZW61 710 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 CYP4V2Q6ZWL3 525 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 DPPA4Q7L190 304 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 SLITRK4Q8IW52 837 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ARHGAP12Q8IWW6 846 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 PAF1Q8N7H5 531 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 FAM71BQ8TC56 605 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 KCTD15Q96SI1 283 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 ARHGAP9Q9BRR9 750 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ZNF670Q9BS34 389 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 CINPQ9BW66 212 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 FAM117AQ9C073 453 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 RAB17Q9H0T7 212 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 DHX35Q9H5Z1 703 aaKnown RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 RDH14Q9HBH5 336 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 SPATS2LQ9NUQ6 558 aaKnown RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 RCOR3Q9P2K3 495 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 DFFAO00273 331 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 TRAFD1O14545 582 aaPredicted RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 TNFRSF10CO14798 259 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 RAD51CO43502 376 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 FAM87AP0C7U9 286 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 ZFXP17010 805 aaPredicted RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 COILP38432 576 aaPredicted RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 ARL4AP40617 200 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 SCNN1BP51168 640 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 MAZP56270 477 aaKnown RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 OR1D5P58170 312 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 CYP4F2P78329 520 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 DR1Q01658 176 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 C16orf72Q14CZ0 275 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 BRD3Q15059 726 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 ACOX1Q15067 660 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 LLGL1Q15334 1064 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 SIX1Q15475 284 aaPredicted RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 AMZ1Q400G9 498 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 MANEAQ5SRI9 462 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 PNCKQ6P2M8 343 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 CCDC137Q6PK04 289 aaKnown RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 TP53INP2Q8IXH6 220 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 IFT20Q8IY31 132 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 CMKLR1Q99788 373 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 WDR26Q9H7D7 661 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 PCDH18Q9HCL0 1135 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 PCYOX1Q9UHG3 505 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 RAB21Q9UL25 225 aa18.58■□□□□ 0.56
SNCB-202ENST00000393693 HEMK1Q9Y5R4 338 aaPredicted RBP18.58■□□□□ 0.56
SNCB-202ENST00000393693 SCN8AQ9UQD0 1980 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 TCRBV7S2A1N4TA0A589 114 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 PRSS38A1L453 326 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 NUDT21O43809 227 aaKnown RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 CST8O60676 142 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 HEXIM1O94992 359 aaKnown RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 FUCA1P04066 466 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 HOXC4P09017 264 aaPredicted RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 ERCC2P18074 760 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 ITGB6P18564 788 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 KELP23276 732 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 HTR7P34969 479 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 DPYSL3Q14195 570 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 MAP9Q49MG5 647 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 SYDE1Q6ZW31 735 aaPredicted RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 NRROSQ86YC3 692 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 NPWQ8N729 165 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 PTCD2Q8WV60 388 aaKnown RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 JPH3Q8WXH2 748 aaPredicted RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 ANKRD7Q92527 254 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 RNF157Q96PX1 679 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 CARS2Q9HA77 564 aaKnown RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 SP110Q9HB58 689 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 SEPT10Q9P0V9 454 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 B4GALT6Q9UBX8 382 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 AMACRQ9UHK6 382 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 UTP11Q9Y3A2 253 aaKnown RBP18.57■□□□□ 0.56
SNCB-202ENST00000393693 PCDHGA4Q9Y5G9 962 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 AHCTF1Q8WYP5 2266 aa18.57■□□□□ 0.56
SNCB-202ENST00000393693 UNC13CQ8NB66 2214 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 H3BRJ5 948 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 DAPK3O43293 454 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 GAS8O95995 478 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 ITGB2P05107 769 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 CCL4P13236 92 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNCB-202ENST00000393693 TBR1Q16650 682 aa18.56■□□□□ 0.56
SNCB-202ENST00000393693 PPP6R3Q5H9R7 873 aaPredicted RBP18.56■□□□□ 0.56
SNCB-202ENST00000393693 DRICH1Q6PGQ1 229 aaPredicted RBP18.56■□□□□ 0.56
SNCB-202ENST00000393693 ZNF574Q6ZN55 896 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms