RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 TMEM270Q6UE05 265 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 ELMOD2Q8IZ81 293 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 TTC29Q8NA56 475 aaPredicted RBP8.09□□□□□ -1.11
LIMS1-203ENST00000393310 SUMF1Q8NBK3 374 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 OR6P1Q8NGX9 317 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 ETNPPLQ8TBG4 499 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 EXT2Q93063 718 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 PABPC3Q9H361 631 aaKnown RBP8.09□□□□□ -1.11
LIMS1-203ENST00000393310 MOV10Q9HCE1 1003 aaKnown RBP8.09□□□□□ -1.11
LIMS1-203ENST00000393310 BRD7Q9NPI1 651 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 KCNK4Q9NYG8 393 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 ARHGAP28Q9P2N2 729 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 ZNF451Q9Y4E5 1061 aa8.09□□□□□ -1.11
LIMS1-203ENST00000393310 URB1O60287 2271 aaKnown RBP8.09□□□□□ -1.11
LIMS1-203ENST00000393310 SPTA1P02549 2419 aa8.09□□□□□ -1.12
LIMS1-203ENST00000393310 CASKO14936 926 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PLD2O14939 933 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 POLR1CO15160 346 aaPredicted RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PCDHGA12O60330 932 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CCNDBP1O95273 360 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 STT3AP46977 705 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 BPIFB3P59826 476 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 TPI1P60174 286 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ETF1P62495 437 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CDC16Q13042 620 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 INSCQ1MX18 579 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ADCK5Q3MIX3 580 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DENND2CQ68D51 928 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PGM2L1Q6PCE3 622 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 C4orf22Q6V702 233 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ZNF438Q7Z4V0 828 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PIK3C3Q8NEB9 887 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DENND6BQ8NEG7 585 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 OR8K3Q8NH51 312 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GOT1L1Q8NHS2 421 aaPredicted RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 FRS2Q8WU20 508 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 METTL21AQ8WXB1 218 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ABCB8Q9NUT2 735 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 LUZP4Q9P127 313 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ZNHIT2Q9UHR6 403 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 RARRES3Q9UL19 164 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 MAN2B2Q9Y2E5 1009 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ZNF236Q9UL36 1845 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 A0A1B0GW55 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ZNF839A8K0R7 811 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 KMOO15229 486 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 MED24O75448 989 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GSTT2P0CG29 244 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GSTT2BP0CG30 244 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L2P0CJ85 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L3P0CJ86 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L4P0CJ87 422 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L5P0CJ88 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L6P0CJ89 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4L7P0CJ90 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 AFF1P51825 1210 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 EPHA5P54756 1037 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GNG2P59768 71 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 SERINC3Q13530 473 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 BLMHQ13867 455 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 QPCTQ16769 361 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ATP13A5Q4VNC0 1218 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 FAM173BQ6P4H8 233 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 RHOUQ7L0Q8 258 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PROSER1Q86XN7 944 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 SIDT2Q8NBJ9 832 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CLEC1AQ8NC01 280 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 LRRC39Q96DD0 335 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 VPS35Q96QK1 796 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CTNNAL1Q9UBT7 734 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DUX4Q9UBX2 424 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 NOVA2Q9UNW9 492 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 SMCHD1A6NHR9 2005 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 KCNN4O15554 427 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 WFS1O76024 890 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GLI1P08151 1106 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 ENPP1P22413 925 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 HLA-FP30511 346 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 OR1E1P30953 314 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 HNF4AP41235 474 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CBX5P45973 191 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 BRMS1LQ5PSV4 323 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 KRT78Q8N1N4 520 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CHDHQ8NE62 594 aaPredicted RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PNO1Q9NRX1 252 aaKnown RBP8.08□□□□□ -1.12
LIMS1-203ENST00000393310 GDAP2Q9NXN4 497 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PLK2Q9NYY3 685 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CEP72Q9P209 647 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 BCAP29Q9UHQ4 241 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 SPACA6W5XKT8 324 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 DLG5Q8TDM6 1919 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PDE9AO76083 593 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 PAEPP09466 180 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 IL10P22301 178 aa8.08□□□□□ -1.12
LIMS1-203ENST00000393310 CARD18P57730 90 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms